DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxn and Cntn2

DIOPT Version :9

Sequence 1:NP_523891.2 Gene:Pxn / 38326 FlyBaseID:FBgn0011828 Length:1527 Species:Drosophila melanogaster
Sequence 2:NP_037016.2 Gene:Cntn2 / 25356 RGDID:3821 Length:1040 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxnNP_523891.2 LRR_RI 51..>161 CDD:238064
leucine-rich repeat 54..77 CDD:275380
LRR_8 55..112 CDD:290566
leucine-rich repeat 78..101 CDD:275380
leucine-rich repeat 102..125 CDD:275380
LRR_8 124..184 CDD:290566
leucine-rich repeat 126..149 CDD:275380
LRR_4 148..185 CDD:289563
leucine-rich repeat 150..173 CDD:275380
Ig 240..325 CDD:299845
IG_like 242..325 CDD:214653
I-set 366..450 CDD:254352
Ig 384..451 CDD:143165
I-set 458..546 CDD:254352
Ig 472..536 CDD:299845
I-set 553..644 CDD:254352
Ig 570..643 CDD:299845
An_peroxidase 777..1317 CDD:281139
peroxidasin_like 898..1338 CDD:188658
VWC 1465..1523 CDD:278520
Cntn2NP_037016.2 Ig 37..133 CDD:416386
Ig strand A 40..44 CDD:409353
Ig strand A' 47..52 CDD:409353
Ig strand B 58..66 CDD:409353
Ig strand C 71..77 CDD:409353
Ig strand C' 79..82 CDD:409353
Ig strand D 89..93 CDD:409353
Ig strand E 95..101 CDD:409353
Ig strand F 108..117 CDD:409353
Ig strand G 120..133 CDD:409353
Ig2_Contactin-2-like 141..230 CDD:409392
Ig strand B 153..157 CDD:409392
Ig strand C 167..171 CDD:409392
Ig strand E 192..196 CDD:409392
Ig strand F 206..211 CDD:409392
Ig strand G 224..227 CDD:409392
Ig 241..326 CDD:416386
Ig strand A 241..246 CDD:409353
Ig strand A' 249..254 CDD:409353
Ig strand B 257..266 CDD:409353
Ig strand C 272..276 CDD:409353
Ig strand C' 279..281 CDD:409353
Ig strand E 291..296 CDD:409353
Ig strand F 304..312 CDD:409353
Ig strand G 315..326 CDD:409353
Ig4_Contactin-2-like 330..414 CDD:143205
Ig strand B 346..350 CDD:143205
Ig strand C 359..363 CDD:143205
Ig strand E 380..384 CDD:143205
Ig strand F 394..399 CDD:143205
Ig strand G 407..410 CDD:143205
Ig5_Contactin 419..507 CDD:409358
Ig strand B 438..442 CDD:409358
Ig strand C 451..455 CDD:409358
Ig strand E 473..477 CDD:409358
Ig strand F 487..492 CDD:409358
Ig strand G 500..503 CDD:409358
Ig 509..605 CDD:416386
Ig strand A 509..515 CDD:409353
Ig strand A' 518..523 CDD:409353
Ig strand B 526..534 CDD:409353
Ig strand C 543..547 CDD:409353
Ig strand D 568..571 CDD:409353
Ig strand E 572..576 CDD:409353
Ig strand F 585..592 CDD:409353
Ig strand G 599..603 CDD:409353
FN3 620..707 CDD:238020
FN3 728..802 CDD:238020
Cell attachment site. /evidence=ECO:0000255 796..798
FN3 817..909 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 895..921
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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