DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxn and ptgs2a

DIOPT Version :9

Sequence 1:NP_523891.2 Gene:Pxn / 38326 FlyBaseID:FBgn0011828 Length:1527 Species:Drosophila melanogaster
Sequence 2:NP_705943.1 Gene:ptgs2a / 246227 ZFINID:ZDB-GENE-020530-2 Length:601 Species:Danio rerio


Alignment Length:604 Identity:121/604 - (20%)
Similarity:213/604 - (35%) Gaps:203/604 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   708 LARAAEIYERTLVNIRKHVQEGDNLTMKSEEYEFRDLLSREHLHLVAELSGCMEHREMPNCTDMC 772
            |::.|:.||   .:..:....|:|.|..       :||:|        :...::.|  ||   :.
Zfish    36 LSKGADAYE---CDCTRTGYYGENCTTP-------ELLTR--------IKSALKPR--PN---VV 77

  Fly   773 FH--SRYRSIDGTCNNLQH--------------------PTWGA-----------SLTAFRRLAP 804
            .|  :.|:||....|::.:                    ||:.|           :|:.:.|...
Zfish    78 HHILTHYKSIWDIINSISYLRDGIMRYILLSRSHLVESPPTYNADYGYKSWEAYSNLSYYTRTLA 142

  Fly   805 PIYENGFSMPVGWTKGMLYSGHAKPSARLVSTSLVATKEITPDARITHMVMQWGQFLDHDLDHAI 869
            |:.:|   .|   |..:       |:|:.|...::..|:..||.:.:.::..:  |..|      
Zfish   143 PLPQN---CP---TPDL-------PNAKQVVEQVLLRKQFIPDPQRSSLMFAF--FAQH------ 186

  Fly   870 PSVSSESWDGIDCKKSCEMAPPCYPIEVPPNDPRVRNRRCIDVVRSSAICGSGMTSLFFDSVQHR 934
               .|..:...|.||.     |.:                      :...|.|            
Zfish   187 ---FSHQFFKSDFKKG-----PAF----------------------TKALGHG------------ 209

  Fly   935 EQINQLTSYIDASQVYGYSTAFAQELRNLTSQEGLLRV-----GVHFPRQKDMLPFAAPQDGMDC 994
                     :|...:||.:.....:||  ..::|.|:.     .|:.|..||:      |..|..
Zfish   210 ---------VDLGHIYGETLEVQHKLR--LFKDGKLKYQVVDGEVYPPLVKDV------QVEMHY 257

  Fly   995 RRNLDENTMSCFVSGDIRVNEQVGLLAMHTIWMREHNRIASKLKQINSHWDGDTLYQEARKIVGA 1059
            ..::.|...  |..|........||:...|||:|||||:...:||.:..||.:.::|..|.|   
Zfish   258 PPHIPEEQK--FAVGHEAFGLVPGLMMYATIWLREHNRVCDIMKQEHPDWDDERIFQTTRLI--- 317

  Fly  1060 QMQHITFKQWLPLIIGESGMEMMGEY----QGYN------PQL--------NPSIANEFATAALR 1106
                         :|||:...::.:|    .|||      |:|        ...||.||.|  |.
Zfish   318 -------------LIGETIKIVIEDYVQHLSGYNFKLKFDPELIFSERFQYQNRIAAEFNT--LY 367

  Fly  1107 FGHTIINPILHRLNETFQPIPQGHLLLHKAFFAPWRLAYEGGVDPLMRGFLAVPAKLKTPDQNLN 1171
            ..|.:       |.:.||  .|..:..:..|.....:....|:..::..|....|...:..:||.
Zfish   368 HWHPL-------LPDNFQ--IQDQIYGYHQFVFNNSIVTTHGIRNMVDSFTKQTAGRVSGGRNLP 423

  Fly  1172 TELTEKLFQTAHAVALDLAAINIQRGRDHGMPGYNVYRKLCNLTVAQDFEDLAGEISSAEIRQKM 1236
                    .....||:.:    :::.|......:|.||:..|:.....||::.|:   .::..::
Zfish   424 --------PAVQGVAVKV----LEQTRQMRYQSFNAYRRRFNMKPYSSFEEMTGD---KDLAAQL 473

  Fly  1237 KELYGHPDNVDVWLGGILE 1255
            ||||||.|.|:::.|.::|
Zfish   474 KELYGHVDKVELYPGLLVE 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxnNP_523891.2 LRR_RI 51..>161 CDD:238064
leucine-rich repeat 54..77 CDD:275380
LRR_8 55..112 CDD:290566
leucine-rich repeat 78..101 CDD:275380
leucine-rich repeat 102..125 CDD:275380
LRR_8 124..184 CDD:290566
leucine-rich repeat 126..149 CDD:275380
LRR_4 148..185 CDD:289563
leucine-rich repeat 150..173 CDD:275380
Ig 240..325 CDD:299845
IG_like 242..325 CDD:214653
I-set 366..450 CDD:254352
Ig 384..451 CDD:143165
I-set 458..546 CDD:254352
Ig 472..536 CDD:299845
I-set 553..644 CDD:254352
Ig 570..643 CDD:299845
An_peroxidase 777..1317 CDD:281139 107/533 (20%)
peroxidasin_like 898..1338 CDD:188658 81/381 (21%)
VWC 1465..1523 CDD:278520
ptgs2aNP_705943.1 EGF_CA 25..58 CDD:238011 6/24 (25%)
prostaglandin_endoperoxide_synthase 78..559 CDD:188648 108/539 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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