DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxn and Ptgs2

DIOPT Version :9

Sequence 1:NP_523891.2 Gene:Pxn / 38326 FlyBaseID:FBgn0011828 Length:1527 Species:Drosophila melanogaster
Sequence 2:NP_035328.2 Gene:Ptgs2 / 19225 MGIID:97798 Length:604 Species:Mus musculus


Alignment Length:563 Identity:119/563 - (21%)
Similarity:195/563 - (34%) Gaps:204/563 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   789 HPTWGA--SLTAFRRLAPPIYENGFSMPVGWTKGMLYSGHAKPSARLVSTSLVATKEITPDARIT 851
            :.:|.|  :|:.:.|..||:.:: ...|:| .||    ....|.::.|...::..:|..||.:.:
Mouse   122 YKSWEAFSNLSYYTRALPPVADD-CPTPMG-VKG----NKELPDSKEVLEKVLLRREFIPDPQGS 180

  Fly   852 HMVMQ-WGQFLDHDL---DHAIPSVSSESWDGIDCKKSCEMAPPCYPIEVPPNDPRVRNRRCIDV 912
            :|:.. :.|...|..   ||                                       :|    
Mouse   181 NMMFAFFAQHFTHQFFKTDH---------------------------------------KR---- 202

  Fly   913 VRSSAICGSGMTSLFFDSVQHREQINQLTSYIDASQVYGYSTAFAQELRNLTSQEGLLR---VG- 973
                   |.|.|             ..|...:|.:.:||.:.....:||  ..::|.|:   :| 
Mouse   203 -------GPGFT-------------RGLGHGVDLNHIYGETLDRQHKLR--LFKDGKLKYQVIGG 245

  Fly   974 -VHFPRQKDMLPFAAPQDGMDCRRNLDENTMSCFVSGDIRVNEQV-----GLLAMHTIWMREHNR 1032
             |:.|..||      .|..|....::.||.       ...|.::|     ||:...|||:|||||
Mouse   246 EVYPPTVKD------TQVEMIYPPHIPENL-------QFAVGQEVFGLVPGLMMYATIWLREHNR 297

  Fly  1033 IASKLKQINSHWDGDTLYQEARKIVGAQMQHITFKQWLPLIIGESGMEMMGEY----QGY----- 1088
            :...|||.:..|..:.|:|.:|.|                :|||:...::.:|    .||     
Mouse   298 VCDILKQEHPEWGDEQLFQTSRLI----------------LIGETIKIVIEDYVQHLSGYHFKLK 346

  Fly  1089 -NPQL--------NPSIANEFATAALRFGHTIINPILHRLNETFQPIPQGHLLLHKAFFAPWRLA 1144
             :|:|        ...||:||.|  |...|.:       |.:||....|.:..  |.|.....:.
Mouse   347 FDPELLFNQQFQYQNRIASEFNT--LYHWHPL-------LPDTFNIEDQEYSF--KQFLYNNSIL 400

  Fly  1145 YEGGVDPLMRGFLAVPAKLKTPDQNLNTELTEKLFQTAHAVALD-LAAINIQRGRDHGMPGYNVY 1208
            .|.|:...:..|....|......:|:             .:|:. :|..:|.:.|:......|.|
Mouse   401 LEHGLTQFVESFTRQIAGRVAGGRNV-------------PIAVQAVAKASIDQSREMKYQSLNEY 452

  Fly  1209 RKLCNLTVAQDFEDLAGEISSAEIRQKMKELYGHPDNVDVWLGGILEDQVEGGKVGPLFQCLLVE 1273
            ||..:|.....||:|.||   .|:..::|.||   .::||.               .|:..||||
Mouse   453 RKRFSLKPYTSFEELTGE---KEMAAELKALY---SDIDVM---------------ELYPALLVE 496

  Fly  1274 QFRRLRDGDRLYYENPGVFSPEQLTQIKQANFGRVLCDVGDNF 1316
            :.|                 |:       |.||..:.::|..|
Mouse   497 KPR-----------------PD-------AIFGETMVELGAPF 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxnNP_523891.2 LRR_RI 51..>161 CDD:238064
leucine-rich repeat 54..77 CDD:275380
LRR_8 55..112 CDD:290566
leucine-rich repeat 78..101 CDD:275380
leucine-rich repeat 102..125 CDD:275380
LRR_8 124..184 CDD:290566
leucine-rich repeat 126..149 CDD:275380
LRR_4 148..185 CDD:289563
leucine-rich repeat 150..173 CDD:275380
Ig 240..325 CDD:299845
IG_like 242..325 CDD:214653
I-set 366..450 CDD:254352
Ig 384..451 CDD:143165
I-set 458..546 CDD:254352
Ig 472..536 CDD:299845
I-set 553..644 CDD:254352
Ig 570..643 CDD:299845
An_peroxidase 777..1317 CDD:281139 119/563 (21%)
peroxidasin_like 898..1338 CDD:188658 99/448 (22%)
VWC 1465..1523 CDD:278520
Ptgs2NP_035328.2 EGF_CA 19..55 CDD:238011
prostaglandin_endoperoxide_synthase 75..562 CDD:188648 119/563 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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