DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxn and C46A5.4

DIOPT Version :9

Sequence 1:NP_523891.2 Gene:Pxn / 38326 FlyBaseID:FBgn0011828 Length:1527 Species:Drosophila melanogaster
Sequence 2:NP_501272.2 Gene:C46A5.4 / 177558 WormBaseID:WBGene00016700 Length:1537 Species:Caenorhabditis elegans


Alignment Length:1411 Identity:361/1411 - (25%)
Similarity:571/1411 - (40%) Gaps:378/1411 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 AQLTTLFLNDNELAYLQDGAL-------NGLTALRFVYLNNNRLSRLPATIFQRMPRLEAIFLEN 133
            |.:.|.:|:.:::....:|.:       ||..|||.|...||:|.         :|         
 Worm   337 ANMVTSYLDLSQIYGSTEGIVKKMRLHKNGKLALRAVGGFNNQLG---------VP--------- 383

  Fly   134 NDIWQLPAGLFDNLPRLNR----LIMYNNKLTQLPVDGFNRLNNLKRLRLDGNAIDCNCGVYSLW 194
                  ||.|..::.|.:.    |:..|||:..||..|                     .:|::|
 Worm   384 ------PANLDSSICRSSTGKPCLLAGNNKINFLPTSG---------------------AIYTIW 421

  Fly   195 RRWHLDVQRQLVSISLTCAAPQMLQNQGFSSLGEHHFKCAKPQFLVAPQDAQVAAGEQVELSCEV 259
            .|.|..:..:|.|::                          |.:    .|.:|            
 Worm   422 MRQHNVIADKLASVN--------------------------PHW----DDQKV------------ 444

  Fly   260 TGLPRPQITWMHNTQELGLEEQAQAEILPSGSLLIRSADTSDMGIYQCIARNEM-------GALR 317
                              .||..:..|..                :|.|..|||       ..||
 Worm   445 ------------------FEEARRITIAQ----------------FQHITFNEMVPVLVGKEQLR 475

  Fly   318 SQPVRLVVNGGNHPLDSPIDARSNQVWADAGTPMHGATPLPSPLPSPPHFTHQPHDQIVALHGSG 382
            ...::|..||.:...|..||:.::.|:|.|..... .|.|||                       
 Worm   476 VMGIKLQKNGYDSGYDINIDSSASNVFASAAGQFF-LTLLPS----------------------- 516

  Fly   383 HVLLDCAASGWPQPDIQWFVNGRQLLQSTPSLQLQANGSLILLQPNQLSAGTYRCEARNSLGSVQ 447
                            |:.:..::....:.||....|...::.:..::          :.:....
 Worm   517 ----------------QFNIEDKRFSTKSESLLKHFNDPALIYEKGRI----------DGMLKFL 555

  Fly   448 ATARIE---LKELPEILTAPQSQTIKLGK---AFVLECDADGNPLPT-IDWQ------------- 492
            ..|.||   |...|.:.||.|.:.|....   |.|::...| :.||: :.|:             
 Worm   556 LNAPIEKPGLHSSPLLRTAFQKKDIADSVDIIAMVIQMGRD-HGLPSYLQWRTFCKLDDFSSFLA 619

  Fly   493 LNGVPLPG-NTPDLQLENENTE----LVVGAARQEHAG-----VYRCTAHNENGETSVEATIKVE 547
            |..:..|. |..|.:...|:.|    .|.|.:.|...|     .:.|...::..:|........|
 Worm   620 LQTIFKPSVNISDFERLYESPEDIDVFVGGLSEQPTKGSLLGPTFACLFAHQMAQTKRGDRFWYE 684

  Fly   548 RSQSPPQLAIEPSNLVAITGTTIELPCQADQ------------PED--GLQISWRHDG--RLIDP 596
            ...||....::..:.:..| |...:.|....            |:|  ...:|....|  ::.||
 Worm   685 NFVSPSAFTVDQIDEIRKT-TMARIICDNTDTVTHVQHHAFSLPDDYGNCPLSCNSTGIIQVFDP 748

  Fly   597 NVQLAEKYQISGAGSLFVKNVTIP----------------DGGRYECQLKNQFGRASASALVTIR 645
            .. ..::.:::   ||.:...|:.                :|.|...||.:    :|.|||::  
 Worm   749 KA-FKDEEKLT---SLPITKETVEKVIRLGLRQWQRYEEGEGRRISAQLSD----SSPSALLS-- 803

  Fly   646 NNVDLAPGDRYVRIA-FAEAAKEID--LAINNTLDMLFSNRSDKAPPNYGELLRVFRFPTGEARQ 707
            :.:.:||....:.|| .|...:|..  |...|.||     :.::.|                   
 Worm   804 HALLMAPKKESIDIARTASVLREATNILISGNGLD-----KDERLP------------------- 844

  Fly   708 LARAAEIYERTLVNIRKHVQEGD---NLTMKSEEYEFRDLLSREHLHLVAELSGCMEHREMPNCT 769
                 ::...||..|...:..|.   |.|    .:..||.|.:|.         |:. ..:|   
 Worm   845 -----DLDIGTLQKILPQIDVGSVIGNFT----PFLARDPLPKEQ---------CLP-EPLP--- 887

  Fly   770 DMCFH-SRYRSIDGTCNNLQHPTWGASLTAFRRLAPPIYENGFSMPVGWTKGMLYSGHAKPSARL 833
              |.| |:||:..|.||||::|.:|.:.|..|||..|.|::||..|  .|:.:|  |...||||.
 Worm   888 --CDHTSKYRTYSGWCNNLKNPKFGNAFTQMRRLLDPAYDDGFDTP--RTRSVL--GSELPSARK 946

  Fly   834 VSTSLVATKEITPDARITHMVMQWGQFLDHDLDHAIPSVSSESWDGIDCKKSCEMAPP----CYP 894
            :| ::|.:.......:.|||:||:||.||||:.|: |.........::| .||:.|..    |:|
 Worm   947 IS-NIVHSDAPKFHVKFTHMLMQFGQILDHDMMHS-PISRGPKNTILNC-SSCDSAQTLSIHCFP 1008

  Fly   895 IEVPPNDPRVRNR------RCIDVVRSSAICGSGMTSLFFDSVQHREQINQLTSYIDASQVYGYS 953
            |::..|||...::      ||:...||..    ...||.|     |.|:|||||::|||.:||.:
 Worm  1009 IKIEANDPFFPSKHSDGRPRCMPFARSLL----AQVSLGF-----RNQLNQLTSFLDASTIYGST 1064

  Fly   954 TAFAQELRNLTSQEGLLRVGVHFPRQKDMLPFAAPQDGM--DCRRNLDENTMSCFVSGDIRVNEQ 1016
            ...|.:|| |.|...|....:.|.::      |.||...  |||..|......|||:||.|.|||
 Worm  1065 QCEANKLR-LFSDGKLNFTDLGFNKE------ALPQGNQERDCRSVLQNRQRRCFVAGDERSNEQ 1122

  Fly  1017 VGLLAMHTIWMREHNRIASKLKQINSHWDGDTLYQEARKIVGAQMQHITFKQWLPLIIGESGME- 1080
            .||.|:|.|::|||||||..|||||:.|..:.|:||:|:|..||:|||.:|:|||:::|...|| 
 Worm  1123 PGLTAIHNIFLREHNRIARYLKQINNFWSDEKLFQESRRINIAQLQHIIYKEWLPVVLGCQNMEK 1187

  Fly  1081 ------MMGEYQGYNPQLNPSIANEFATAALRFGHTIINPILHRLNETFQPIPQGHLLLHKAFFA 1139
                  ..|.::||:.|.:.:|:.|.:|:|.||||::|..:..|:|:.||.: ..|:.|.:.|..
 Worm  1188 WGLMPQTAGYFEGYDDQCDATISQEMSTSAFRFGHSLIRGVFTRMNDNFQNM-TNHVNLTETFSN 1251

  Fly  1140 PWRLAYE---GGVDPLMRGFLAVPAKLKTPDQNLNTELTEKLFQT--AHAVALDLAAINIQRGRD 1199
            | ...|:   |.::.::.|.:.  |.....|:::.|.:...||..  .....|||.|:|||||||
 Worm  1252 P-SPVYDKNSGHMESILMGLIG--ANSMAFDRHIVTAVRNHLFAKPGGPLTGLDLPAVNIQRGRD 1313

  Fly  1200 HGMPGYNVYRKLCNLTVAQDFEDLAGEISSAEIRQKMKELYGHPDNVDVWLGGILEDQVEGGKVG 1264
            ||:.|||.|||.|.|..|..|.||. ::.::|....::..|.|.|::|::.|.:.|....|..||
 Worm  1314 HGVQGYNAYRKHCGLRKASAFSDLR-DVMNSEAVTALETAYAHVDDIDLFPGIMSESPTRGSLVG 1377

  Fly  1265 PLFQCLLVEQFRRLRDGDRLYYENPGV---FSPEQLTQIKQANFGRVLCDVGDNFDQVTENVFIL 1326
            |...||:.||.:||:..||.|||....   |:|:||.:|::|:..|::||..:....:..|||::
 Worm  1378 PTLACLIGEQMQRLKKCDRFYYETSDSMVRFTPDQLVEIRKASLSRIICDNSEYAANIQPNVFLM 1442

  Fly  1327 AKH-QGGYKKCEDIIGINLYLWQECGRCNSPPAIFDSYIPQTYTKR 1371
            ... ......|.::..|:|..|.|...|    .:.:..:.:..|||
 Worm  1443 PDDLTNSPMTCSELSEIDLNKWVERDYC----LVDERVVNRGKTKR 1484

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
PxnNP_523891.2 LRR_RI 51..>161 CDD:238064 22/95 (23%)