DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pxn and AgaP_AGAP012635

DIOPT Version :9

Sequence 1:NP_523891.2 Gene:Pxn / 38326 FlyBaseID:FBgn0011828 Length:1527 Species:Drosophila melanogaster
Sequence 2:XP_307249.3 Gene:AgaP_AGAP012635 / 1268683 VectorBaseID:AGAP012635 Length:561 Species:Anopheles gambiae


Alignment Length:658 Identity:130/658 - (19%)
Similarity:206/658 - (31%) Gaps:220/658 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 SVYCPAGCTC-----LERTVRCIRAKL-SAVPKLPQDTQTLDLRFNHIEELPANAFSGLAQLTTL 81
            |.:||..|:|     |:| ..|...|| :....:|.|.:.|||..|.|..:....|.....|..|
Mosquito     2 SKFCPKICSCDVIEDLKR-ADCSNEKLINTYTDVPYDVEILDLSINIISTIENENFMHYDNLVKL 65

  Fly    82 FLNDNELAYLQDGALNGLTALRFVYLNNNRLSRLPATIFQRMPRLEAIFLENNDIWQLP------ 140
            ||::|.:..:...|......|..:.|:.|||..|...:|:|..:|..:.|..|:...||      
Mosquito    66 FLSENSIQTISLDAFANQQRLTTLDLSYNRLEHLNEHLFERNLQLVDLNLSGNNFMMLPNTPFLK 130

  Fly   141 ------------------AGLFDNLPRLNRLIMYNNKLTQLPVDGFNRLNNLKRLRLDGNAIDCN 187
                              ..:|.:||.|..|.:..|.:..|....|..|..|..|.|..|..||.
Mosquito   131 SYSIMFLHLASCRIPHVFDTMFIDLPNLKSLDLAKNIMNSLSTVPFAHLRKLNSLNLMDNRWDCK 195

  Fly   188 CGVYSLWRRW------HLDVQRQLVS-IS---------LTCAAPQMLQNQGFSSLGEHHFKCAKP 236
            ........||      .|.|...|:| :|         :...|.|..:|.......||.:..:||
Mosquito   196 TEDVRSTVRWMKTRVPTLIVDSCLLSDLSYKGDRFERIMEDPALQEKKNSRQDVAIEHVWGTSKP 260

  Fly   237 QFLVAPQDAQVAAGEQ-----VELSCEVTGL---------------PRPQITWMHNTQELGLEEQ 281
            ..   .:|    .||.     :..||..|.|               .:......|..::|...::
Mosquito   261 SL---SRD----GGELHWPLFMNRSCSYTELEDDLSKESCVQFAECQKKYSELYHAHKQLLSRKK 318

  Fly   282 AQA------EILPSGS---LLIRSADTSDM--GIYQCIARNEMGALRSQPV----RL------VV 325
            ||.      .:...|:   ||:.|..|..:  .:..|  ||.....|:..:    ||      .:
Mosquito   319 AQCGGYFRIGVFIGGALVGLLVGSFTTYTVSWAVRSC--RNRSARKRTHQIPDHKRLQRELTREI 381

  Fly   326 NGGN---HPL--DSPIDARSNQVWADAGTPMHGATPLPSPLPSPPHFTHQPHDQIVALHGSGHVL 385
            .|.|   |..  :||:.||:::..|.:           :||....:..|: |.:           
Mosquito   382 RGRNQFEHTRLNESPVFARNDRFPASS-----------APLQDEIYRNHE-HTR----------- 423

  Fly   386 LDCAASGWPQPDIQWFVNGRQLLQSTPSLQLQANGSLILLQPNQLSAGTYRCEARNSLGSVQATA 450
                         |:.||   |........:::|..|..:....:.....|.|.|.::..||..|
Mosquito   424 -------------QFLVN---LFSKRQHRYVRSNSQLANINNRYIPPTQTRDEPREAVNVVQRVA 472

  Fly   451 RIELKELPEILTAPQSQTIKLGKAFVLECDADGNPLPTIDWQLNGVPLPGNTPDLQLENENTELV 515
                                          :|..||    |:                       
Mosquito   473 ------------------------------SDAEPL----WE----------------------- 480

  Fly   516 VGAARQEHAGVYRCTAHNENGETSV-----EATIKVERSQSPPQLAIEPSNLVAITGTTIELP-C 574
                        :.::||::.:..:     ||:..:...|.|..::|.|:.    .||....| .
Mosquito   481 ------------QYSSHNQSEQEQMLSNDPEASFGLSGDQQPTWISIRPNG----NGTLTRSPRL 529

  Fly   575 QADQPEDG 582
            :.|.|..|
Mosquito   530 RHDVPTAG 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxnNP_523891.2 LRR_RI 51..>161 CDD:238064 33/133 (25%)
leucine-rich repeat 54..77 CDD:275380 6/22 (27%)
LRR_8 55..112 CDD:290566 15/56 (27%)
leucine-rich repeat 78..101 CDD:275380 6/22 (27%)
leucine-rich repeat 102..125 CDD:275380 8/22 (36%)
LRR_8 124..184 CDD:290566 18/83 (22%)
leucine-rich repeat 126..149 CDD:275380 7/46 (15%)
LRR_4 148..185 CDD:289563 11/36 (31%)
leucine-rich repeat 150..173 CDD:275380 6/22 (27%)
Ig 240..325 CDD:299845 22/125 (18%)
IG_like 242..325 CDD:214653 22/123 (18%)
I-set 366..450 CDD:254352 13/83 (16%)
Ig 384..451 CDD:143165 11/66 (17%)
I-set 458..546 CDD:254352 8/92 (9%)
Ig 472..536 CDD:299845 6/63 (10%)
I-set 553..644 CDD:254352 8/31 (26%)
Ig 570..643 CDD:299845 4/14 (29%)
An_peroxidase 777..1317 CDD:281139
peroxidasin_like 898..1338 CDD:188658
VWC 1465..1523 CDD:278520
AgaP_AGAP012635XP_307249.3 LRR_RI 37..>190 CDD:238064 38/152 (25%)
leucine-rich repeat 38..61 CDD:275380 6/22 (27%)
LRR_8 61..120 CDD:290566 17/58 (29%)
LRR_4 61..101 CDD:289563 12/39 (31%)
leucine-rich repeat 62..85 CDD:275380 6/22 (27%)
leucine-rich repeat 86..109 CDD:275380 8/22 (36%)
leucine-rich repeat 110..133 CDD:275380 5/22 (23%)
leucine-rich repeat 134..157 CDD:275380 2/22 (9%)
LRR_8 137..191 CDD:290566 12/53 (23%)
leucine-rich repeat 158..181 CDD:275380 6/22 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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