DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16758 and Pnp2

DIOPT Version :9

Sequence 1:NP_001261330.1 Gene:CG16758 / 38315 FlyBaseID:FBgn0035348 Length:396 Species:Drosophila melanogaster
Sequence 2:XP_011243453.2 Gene:Pnp2 / 667034 MGIID:3712328 Length:337 Species:Mus musculus


Alignment Length:332 Identity:152/332 - (45%)
Similarity:203/332 - (61%) Gaps:30/332 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 TCSDKKGAKAGSLTGEKIIPTPQSLLGNGKIQCELTHEELRALRVLNEDTYPYEVIEEIADFITK 126
            :||..||....:.:|      |.|.:|.                      :.||..|..|.::.:
Mouse    30 SCSGMKGVSCQAFSG------PDSAVGR----------------------FTYEDYETTAKWLLQ 66

  Fly   127 GSGMRPKIGIICGSGLGSLADMIQDPKIFEYEKIPNFPVSTVEGHAGRLVVGTLEGATVMAMQGR 191
            .:..||::.:|||||||.|...::..:||:|.:|||||.|||:|||||||.|.|.|.:.:.||||
Mouse    67 HTEYRPQVAVICGSGLGGLTAHLKAAQIFDYNEIPNFPQSTVQGHAGRLVFGLLNGRSCVMMQGR 131

  Fly   192 FHFYEGYPLAKCSMPVRVMKLCGVEYLFATNAAGGINPRFAVGDIMLMHDHVNMLGFAGNSPLQG 256
            ||.||||.|::.:.||||..|.|||.|..||||||:||.|.||||||:.||:|:.||.|.:||:|
Mouse   132 FHMYEGYSLSEVTFPVRVFHLLGVETLVVTNAAGGLNPNFEVGDIMLIRDHINLPGFCGQNPLRG 196

  Fly   257 PNDPRFGPRFPALVNSYNKDLINKAIEIAKAMGIESNIHVGVYSCLGGPNYETIAELKALRMMGV 321
            |||.|||.||||:.::|::|:..||....|.||.:..:..|.|..|.|||:||:||.:.|:|:|.
Mouse   197 PNDERFGVRFPAMSDAYDRDMRQKAFSAWKQMGEQRKLQEGTYVMLAGPNFETVAESRLLKMLGA 261

  Fly   322 DAVGMSTVHEVITARHCDMKVFAFSLITNKCATEYSDKKDDEANHDEVMAVAKNRQKACCELVSR 386
            ||||||||.|||.||||.::||.||||||....:|.:.  ::|||.||:...|...:.....||.
Mouse   262 DAVGMSTVPEVIVARHCGLRVFGFSLITNMVVMDYENL--EKANHKEVLDAGKAAAQKLERFVSI 324

  Fly   387 LIREIHL 393
            |:..|.|
Mouse   325 LMESIPL 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16758NP_001261330.1 PRK08202 113..391 CDD:236183 142/277 (51%)
XapA 116..391 CDD:223084 140/274 (51%)
Pnp2XP_011243453.2 PNP-EcPNPII_like 55..323 CDD:350160 138/269 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837084
Domainoid 1 1.000 282 1.000 Domainoid score I1646
eggNOG 1 0.900 - - E1_COG0005
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H227
Inparanoid 1 1.050 298 1.000 Inparanoid score I2697
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58962
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001804
OrthoInspector 1 1.000 - - otm43350
orthoMCL 1 0.900 - - OOG6_101826
Panther 1 1.100 - - O PTHR11904
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1164
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.760

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