DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16758 and pnp4b

DIOPT Version :9

Sequence 1:NP_001261330.1 Gene:CG16758 / 38315 FlyBaseID:FBgn0035348 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_991206.1 Gene:pnp4b / 402940 ZFINID:ZDB-GENE-040426-1887 Length:304 Species:Danio rerio


Alignment Length:266 Identity:132/266 - (49%)
Similarity:181/266 - (68%) Gaps:2/266 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 RPKIGIICGSGLGSLADMIQDPKIFEYEKIPNFPVSTVEGHAGRLVVGTLEGATVMAMQGRFHFY 195
            ||||.::||||||.|||.:.:.:.|.||.|||||||||.||.|.||.|.::|.:.:.||||||.|
Zfish    29 RPKIAVVCGSGLGLLADNVPNKQSFRYEDIPNFPVSTVPGHEGCLVFGQIKGKSCVFMQGRFHLY 93

  Fly   196 EGYPLAKCSMPVRVMKLCGVEYLFATNAAGGINPRFAVGDIMLMHDHVNMLGFAGNSPLQGPNDP 260
            |||.|.|.:.|||:.||.|||.:..|||:||:...|.|||||::.||:|:.||||..||.||||.
Zfish    94 EGYSLCKVTFPVRIFKLMGVETIIVTNASGGLCQDFKVGDIMVIKDHINLPGFAGQHPLCGPNDE 158

  Fly   261 RFGPRFPALVNSYNKDLINKAIEIAKAMGIESNIHVGVYSCLGGPNYETIAELKALRMMGVDAVG 325
            |||.|||.:.::|:|||....::|...:|..:.:|.|||..:.|||:|||||.:.|.::|.|:||
Zfish   159 RFGIRFPCMSDAYSKDLRKLVMDITAELGYSNFVHEGVYCMVSGPNFETIAEARMLHILGSDSVG 223

  Fly   326 MSTVHEVITARHCDMKVFAFSLITNKCATEYSDKKDDEANHDEVMAVAKNRQKACCELVSRLIRE 390
            ||||.||..|:||.::|...||||||.:.:||  ::::.||:||:.::|.|.:....::...|..
Zfish   224 MSTVPEVTVAKHCGLRVMGLSLITNKVSLDYS--REEKVNHEEVLQISKMRAEMLQNVLITFIAR 286

  Fly   391 IHLASA 396
            .|...|
Zfish   287 SHQVEA 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16758NP_001261330.1 PRK08202 113..391 CDD:236183 130/259 (50%)
XapA 116..391 CDD:223084 130/259 (50%)
pnp4bNP_991206.1 PRK08202 18..286 CDD:236183 130/258 (50%)
XapA 25..286 CDD:223084 130/258 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580630
Domainoid 1 1.000 295 1.000 Domainoid score I1457
eggNOG 1 0.900 - - E1_COG0005
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 308 1.000 Inparanoid score I2603
OMA 1 1.010 - - QHG58962
OrthoDB 1 1.010 - - D1078969at2759
OrthoFinder 1 1.000 - - FOG0001804
OrthoInspector 1 1.000 - - otm24373
orthoMCL 1 0.900 - - OOG6_101826
Panther 1 1.100 - - O PTHR11904
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1164
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.770

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