DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16758 and pnp-1

DIOPT Version :9

Sequence 1:NP_001261330.1 Gene:CG16758 / 38315 FlyBaseID:FBgn0035348 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_001368342.1 Gene:pnp-1 / 176851 WormBaseID:WBGene00019298 Length:318 Species:Caenorhabditis elegans


Alignment Length:288 Identity:124/288 - (43%)
Similarity:169/288 - (58%) Gaps:8/288 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 DTYPYEVIEEIADFITKGSG---MRPKIGIICGSGLGSLADMIQDPKIFEYEKIPNFPVSTVEGH 171
            |...|:.:..:|..|.:..|   .|..:|||||||||.:.|.:||..|..|.|||.||.:.|.||
 Worm    35 DPRNYDDVLSVAASIREQVGEDVARADLGIICGSGLGPIGDTVQDATILPYSKIPGFPTTHVVGH 99

  Fly   172 AGRLVVGTLEGATVMAMQGRFHFYE-GYPLAKCSMPVRVMKLCGVEYLFATNAAGGINPRFAVGD 235
            .|.::.|.|.|..|:.:|||||.|| ...||.|::|||||...|::.:..:|||||||.....||
 Worm   100 KGNMIFGKLGGKKVVCLQGRFHPYEHNMDLALCTLPVRVMHQLGIKIMIVSNAAGGINAVLRHGD 164

  Fly   236 IMLMHDHVNMLGFAGNSPLQGPNDPRFGPRFPALVNSYNKDLINKAIEIAKAMGIESNIHVGVYS 300
            :||:.||:.:...||.|||.|.||||||.||.::.::|:|.|...||::.:..  :..::.|||.
 Worm   165 LMLIKDHIFLPALAGFSPLVGCNDPRFGARFVSVHDAYDKQLRQLAIDVGRRS--DMTLYEGVYV 227

  Fly   301 CLGGPNYETIAELKALRMMGVDAVGMSTVHEVITARHCDMKVFAFSLITNKCATEYSDKKDDEAN 365
            ..|||.||:.||:...:.:|.||:||||.|||..||.|.:||..||||||  ..........|.:
 Worm   228 MSGGPQYESPAEVSLFKTVGADALGMSTCHEVTVARQCGIKVLGFSLITN--IANLDADASVEVS 290

  Fly   366 HDEVMAVAKNRQKACCELVSRLIREIHL 393
            |:|||.:|:...:.....||.:|.||.|
 Worm   291 HEEVMDIAQQAGERASRFVSDIITEITL 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16758NP_001261330.1 PRK08202 113..391 CDD:236183 120/281 (43%)
XapA 116..391 CDD:223084 119/278 (43%)
pnp-1NP_001368342.1 PNPH 61..314 CDD:273764 114/256 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159308
Domainoid 1 1.000 218 1.000 Domainoid score I1530
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H227
Inparanoid 1 1.050 223 1.000 Inparanoid score I2259
Isobase 1 0.950 - 0 Normalized mean entropy S669
OMA 1 1.010 - - QHG58962
OrthoDB 1 1.010 - - D1078969at2759
OrthoFinder 1 1.000 - - FOG0001804
OrthoInspector 1 1.000 - - otm14194
orthoMCL 1 0.900 - - OOG6_101826
Panther 1 1.100 - - LDO PTHR11904
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1164
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.860

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