DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d20 and CYP88A3

DIOPT Version :10

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_172008.1 Gene:CYP88A3 / 839311 AraportID:AT1G05160 Length:490 Species:Arabidopsis thaliana


Alignment Length:530 Identity:114/530 - (21%)
Similarity:200/530 - (37%) Gaps:145/530 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LAFEKSAIPGPISIPILGC-GLQALHLGAENIIGWVGEKFDKYGKTFRF-------W-ILGESLI 81
            :|...|.||....:.:||| ||..|   ...:..|:.|  ...|:...:       | .:|..|.
plant     1 MAETTSWIPVWFPLMVLGCFGLNWL---VRKVNVWLYE--SSLGENRHYLPPGDLGWPFIGNMLS 60

  Fly    82 YTKDLQYFETILSSTTLLE----KGQLYEYLRPFLNDGLLVST---------------------- 120
            :.:..:..:....:.||::    || :|: ...|.|..::|:|                      
plant    61 FLRAFKTSDPDSFTRTLIKRYGPKG-IYK-AHMFGNPSIIVTTSDTCRRVLTDDDAFKPGWPTST 123

  Fly   121 ----GRK--------WHARRKIFTHA---FHFKVLEHYVEIMDRHSSVMVDNLRKVAD------- 163
                |||        .|.|.:..|.|   .| :.|..|:..::.:...::|...|:.:       
plant   124 MELIGRKSFVGISFEEHKRLRRLTAAPVNGH-EALSTYIPYIEENVITVLDKWTKMGEFEFLTHL 187

  Fly   164 GKTAVDMLKYVSLAA-----LDVI----TEAAMGVQVNAQNDPDFPYIKALKS----VVYIQPDR 215
            .|....::.|:.|::     :|.:    |....||:..|.|.|.|.|.:|||:    |...|...
plant   188 RKLTFRIIMYIFLSSESENVMDALEREYTALNYGVRAMAVNIPGFAYHRALKARKTLVAAFQSIV 252

  Fly   216 MFRFSRRYNWLFPLAAPLLHRQLLSDIRVMHDFTDKVISERRETVRRAKADGTYRPLSLGDAEIG 280
            ..|.::|            .:.:||:.:   |..|.:::.:.|       ||.    :|.|.|| 
plant   253 TERRNQR------------KQNILSNKK---DMLDNLLNVKDE-------DGK----TLDDEEI- 290

  Fly   281 SKSQMALLDILLQSSINNQPLSDADIREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEE 345
                   :|:||.                   ::..|.:::...:..|...:..||||.||...|
plant   291 -------IDVLLM-------------------YLNAGHESSGHTIMWATVFLQEHPEVLQRAKAE 329

  Fly   346 LQRVL--GPDASAPVTQAQLQDLKYLDCVIKETMRLYPPVPAIGRHAQKELEIGDKTIPANTSIY 408
            .:.:|  .|:....::..:.:.:::|..|:.||:|:........|.|:.::|:....||....:.
plant   330 QEMILKSRPEGQKGLSLKETRKMEFLSQVVDETLRVITFSLTAFREAKTDVEMNGYLIPKGWKVL 394

  Fly   409 LVLYYAHRDANYFPDPLSFRPERFLEDQEQGHNTF-----AYVPFSAGPKNCIGQKFAVLEMKVL 468
            ......|.|...||||..|.|.|:       .|.|     |::||.||...|.|...|.||:.:.
plant   395 TWFRDVHIDPEVFPDPRKFDPARW-------DNGFVPKAGAFLPFGAGSHLCPGNDLAKLEISIF 452

  Fly   469 ISKVLRFYEL 478
            :...|..|::
plant   453 LHHFLLKYQV 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 CYP4 68..501 CDD:410721 102/487 (21%)
CYP88A3NP_172008.1 PLN02302 3..490 CDD:215171 113/528 (21%)

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