DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d20 and CYP86C3

DIOPT Version :9

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_172773.4 Gene:CYP86C3 / 837871 AraportID:AT1G13140 Length:534 Species:Arabidopsis thaliana


Alignment Length:484 Identity:120/484 - (24%)
Similarity:206/484 - (42%) Gaps:73/484 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GPISIPILGCGLQALHLGAENIIGWVGEKFDKYGKTFRF---WILGESLIYT---KDLQYFETIL 93
            ||...|:.|. .........::.||......|...||.:   |:.|.....|   .:::|.  :.
plant    45 GPTIWPVFGI-TPEFFFHRNDVYGWATRCLKKCRGTFLYNGIWLGGSYGAVTCVPANVEYM--LK 106

  Fly    94 SSTTLLEKGQLY-EYLRPFLNDGLLVSTGRKWHARRKIFTHAFH-FKVLEH-YVEIMDRHSSVMV 155
            ::.....||..: |.....|.||:..:....|..:|:|.....| .:.:|| :....|.....::
plant   107 TNFKNFPKGAFFKERFNDLLEDGIFNADAESWKEQRRIIITEMHSTRFVEHSFQTTQDLVRKKLL 171

  Fly   156 DNLRKVADGKTAVDMLKYVSLAALDVITEAAMGVQVNAQNDP-----DFPYIKALKSVVYIQPDR 215
            ..:...|..:.|.|:...:.....|.|..|.:|      :||     |.|.:...::........
plant   172 KVMESFARSQEAFDLQDVLLRLTFDNICIAGLG------DDPGTLDSDLPLVPFAQAFEEATEST 230

  Fly   216 MFRFSRRYNWLFP--LAAPL------LHRQLLSDIRVMHDFTDKVISERRETVRRAKADGTYRPL 272
            ||||      :.|  :..||      ..:.|...:.|:|:|.||::.:|   :.:.|.:||    
plant   231 MFRF------MIPPFIWKPLKFFDIGYEKGLRKAVDVVHEFVDKMVVDR---ICKLKEEGT---- 282

  Fly   273 SLGDAEIGSKSQMALLDILLQS---SINNQPLSDADIREEVDTFMFEGDDTTSSGVSHALYAIAR 334
                  :|::|.:....|.::|   :....|.:....|:...:|:..|.||:|..::...:.|.:
plant   283 ------LGNRSDVLSRIIEIESHKTTDEKDPSTIKFFRQFCTSFILAGRDTSSVALTWFFWVIQK 341

  Fly   335 HPEVQQRIFEELQRVLGPDASAPV-------TQAQLQDLKYLDCVIKETMRLYPPVPAIGRHAQK 392
            ||||:.:|..|:..:|.....:|.       |..:|.|:.||...:.||||||||:|...:.|.:
plant   342 HPEVENKIIREISEILRQRGDSPTSKNESLFTVKELNDMVYLQAALSETMRLYPPIPMEMKQAIE 406

  Fly   393 ELEIGDKT-IPANTSIYLVLYYAHR-DANYFPDPLSFRPER------FLEDQEQGHNTFAYVPFS 449
            :....|.| |...:.:|...|...| ::.:..|..||:|||      |:.|.:     |.||.|:
plant   407 DDVFPDGTFIRKGSRVYFATYAMGRMESIWGKDCESFKPERWIQSGNFVNDDQ-----FKYVVFN 466

  Fly   450 AGPKNCIGQKFAVLEMKVLISKVLRFYEL 478
            |||:.|:|:.||.|:||.:.:.||..|.:
plant   467 AGPRLCLGKTFAYLQMKTIAASVLSRYSI 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 p450 34..493 CDD:278495 120/484 (25%)
CYP86C3NP_172773.4 CYP86A 80..517 CDD:410687 112/448 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 151 1.000 Domainoid score I1385
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8393
orthoMCL 1 0.900 - - OOG6_114749
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.820

Return to query results.
Submit another query.