DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d20 and AT5G08250

DIOPT Version :9

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001330676.1 Gene:AT5G08250 / 830721 AraportID:AT5G08250 Length:550 Species:Arabidopsis thaliana


Alignment Length:503 Identity:115/503 - (22%)
Similarity:216/503 - (42%) Gaps:65/503 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 PILGCGLQALHLGAENIIGWVGEKFDKYGKTFRF---WILGESLIYTKDLQYFETILSST-TLLE 100
            |::|.....:.....||..|:.:.......||||   |....:.:.|.|.:..|.:|.:. ::..
plant    67 PLVGMLPSLISAVRSNIYEWLSDVLISQNGTFRFRGPWFSTLNCVVTCDPRNVEHLLKTRFSIYP 131

  Fly   101 KGQLY-EYLRPFLNDGLLVSTGRKWHARRKIFTHAFHFKVLEHYVEIMDRHSSVMVDN-LRKVAD 163
            ||..: |.::..|.||:..:....|..:||..:..||   ...:.::..:....:|.| |..|.:
plant   132 KGSYFRETMQDLLGDGIFNTDDGTWQRQRKAASVEFH---SAKFRQLTSQSLHELVHNRLLPVLE 193

  Fly   164 GKTAVDMLKYVSLAALDVITEAAMGVQVNAQND--PDFPYIKALKS------VVYIQPDRMFRFS 220
            ....:|:...:.....|.:...|.||.....:.  |:.|:.||.:.      |.::.|..:::..
plant   194 TSGKIDLQDILLRLTFDNVCMIAFGVDPGCLSPKLPEIPFAKAFEDATEATVVRFVMPKFVWKLM 258

  Fly   221 RRYNWLFPLAAPLLHRQLLSDIRVMHDFTDKVISERRETVRRAKADGTYRPLSLGDAEIGSKSQM 285
            |..|    |..   .::|...|..:.||.::||..|:            :.:|| :.||..:..:
plant   259 RSLN----LGT---EKKLKESINGVDDFAEEVIRTRK------------KEMSL-ETEIAKRPDL 303

  Fly   286 ALLDILLQSSINNQPLSDADIREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEEL---- 346
            ..:.:.|:.. |.|..||..:|:....|:..|.||:|..:|...:.|.::|||:::|...:    
plant   304 LTIFMGLRDE-NGQKFSDKFLRDICVNFILAGRDTSSVALSWFFWLIEKNPEVEEKIMMGICKIL 367

  Fly   347 -QRVLGPDAS-----APVTQ-AQLQDLKYLDCVIKETMRLYPPVPAIGRHAQKELEIGDKTIPAN 404
             |||...|..     .||.: .:::.:.||...:.||:||||.||.    ..||: :.|...|..
plant   368 EQRVDHGDTKKNMEYEPVFRPEEIKKMDYLQAALSETLRLYPSVPV----DHKEV-LEDDVFPDG 427

  Fly   405 TS-------IYLVLYYAHRDANYFPDPLSFRPERFLED-QEQGHNTFAYVPFSAGPKNCIGQKFA 461
            |.       ||.:......:..:..|...|:|||:|.| :....:.:.:..|:.||:.|:|:.||
plant   428 TKLKKGEKVIYAIYAMGRMETIWGKDCREFKPERWLRDGRYMSESAYKFTAFNGGPRLCLGKDFA 492

  Fly   462 VLEMKVLISKVLRFYELL---PLGEELKPMLNFILRSASGINVGLRPR 506
            ..:|:.:.:.::..|::.   ..|.:::|.:...:....|:.|.:..|
plant   493 YYQMRYVAAAIIYRYKVRVDDKGGHKVEPKMALTMYMKHGLKVNMVKR 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 p450 34..493 CDD:278495 112/488 (23%)
AT5G08250NP_001330676.1 CYP86A 98..533 CDD:410687 106/463 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 151 1.000 Domainoid score I1385
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8393
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.