DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d20 and LUT1

DIOPT Version :9

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_190881.2 Gene:LUT1 / 824479 AraportID:AT3G53130 Length:539 Species:Arabidopsis thaliana


Alignment Length:504 Identity:125/504 - (24%)
Similarity:222/504 - (44%) Gaps:75/504 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WLTLITGALILLLTWDFGRKRQRVLAFEKSAIPGPISIPILGCGLQ--------ALHLGAENIIG 58
            |||.:|                |.|:..|:...|   |||....|.        ||.|   .:..
plant    61 WLTTLT----------------RTLSSGKNDESG---IPIANAKLDDVADLLGGALFL---PLYK 103

  Fly    59 WVGEKFDKYGKTFRFWILGESLIYTKDLQYFETILSSTTLLEKGQLYEYLRPFLNDGLLVSTGRK 123
            |:.|    ||..:|......:.:...|....:.:|.:.....||.:.|........|..::.|..
plant   104 WMNE----YGPIYRLAAGPRNFVIVSDPAIAKHVLRNYPKYAKGLVAEVSEFLFGSGFAIAEGPL 164

  Fly   124 WHARRKIFTHAFHFKVLEHYVE-IMDRHSSVMVDNLRKVADGKTAVDMLKYVSLAALDVITEAAM 187
            |.|||:....:.|.:.|...|| :..:.:..:|:.|:..|:..:||:|....|...||||     
plant   165 WTARRRAVVPSLHRRYLSVIVERVFCKCAERLVEKLQPYAEDGSAVNMEAKFSQMTLDVI----- 224

  Fly   188 GVQVNAQN----DPDFPYIK----ALKSVVYIQPDRMFRFSRRYNWLFPLAAPLLHRQLLSD--I 242
            |:.:...|    ..|.|.|:    |||.......|.:     .| |.......::.||:.::  :
plant   225 GLSLFNYNFDSLTTDSPVIEAVYTALKEAELRSTDLL-----PY-WKIDALCKIVPRQVKAEKAV 283

  Fly   243 RVMHDFTDKVISERRETVRRAKADGTYRPLSLGDAEIGSKSQMALLDILLQSSINNQPLSDADIR 307
            .::.:..:.:|::.:|.|.|   :|.    .:.|.|..:.:..::|..||.|   .:.:|...:|
plant   284 TLIRETVEDLIAKCKEIVER---EGE----RINDEEYVNDADPSILRFLLAS---REEVSSVQLR 338

  Fly   308 EEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLGPDASAPVTQAQLQDLKYLDCV 372
            :::.:.:..|.:||.|.::..||.::::....::..||:.|||  :...|..: .:::|||:...
plant   339 DDLLSMLVAGHETTGSVLTWTLYLLSKNSSALRKAQEEVDRVL--EGRNPAFE-DIKELKYITRC 400

  Fly   373 IKETMRLYPPVPAIGRHAQ-KELEIGDKTIPANTSIYLVLYYAHRDANYFPDPLSFRPERFLED- 435
            |.|:|||||..|.:.|.|| .::..|:..:.....|.:.:|..||.:..:.....|.||||..| 
plant   401 INESMRLYPHPPVLIRRAQVPDILPGNYKVNTGQDIMISVYNIHRSSEVWEKAEEFLPERFDIDG 465

  Fly   436 --QEQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLR--FYELLP 480
              ..:.:..|.::|||.||:.|:|.:||::|..|.::..|:  ..||:|
plant   466 AIPNETNTDFKFIPFSGGPRKCVGDQFALMEAIVALAVFLQRLNVELVP 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 p450 34..493 CDD:278495 118/472 (25%)
LUT1NP_190881.2 PLN02936 56..539 CDD:178524 125/504 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8393
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24291
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.020

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