DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d20 and CYP76C3

DIOPT Version :9

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_182082.2 Gene:CYP76C3 / 819166 AraportID:AT2G45580 Length:515 Species:Arabidopsis thaliana


Alignment Length:536 Identity:113/536 - (21%)
Similarity:235/536 - (43%) Gaps:72/536 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWLTLITGA------LILLLTWDFGRKRQRVLAFEKSAIPGPISIPILGCGLQALHLGAENI--I 57
            |.|:||.|.      |:.|..:.|...:.|..:...:..|||..:|::|           ||  :
plant     1 MDLSLIQGMSLPLYFLLTLFFFFFATAKTRRSSSTGTLPPGPPILPLVG-----------NIFQL 54

  Fly    58 GWVGEK----FDK-YG--KTFRFWILGESLIYTKD-----LQYFETILSSTTLLEKGQLYEYLRP 110
            |:...:    |.| ||  .:.:...|...:|.:.:     |:..:.::|:.|..:..:.:::.:.
plant    55 GFNPHRSLAAFSKTYGPIMSLKLGRLTAVVISSPEAAKEALRTHDHVMSARTFNDALRAFDHHKH 119

  Fly   111 FLNDGLLVSTGRKWHARRKIFT-HAFHFKVLEHYVEIMDRHSSVMVDNLRKVADGKTAVDMLKYV 174
            .:   :.:....:|...:|..| :....:.|:....:..|....:|..:.:..:...|:|:.:..
plant   120 SI---VWIPPSARWRFLKKTITKYLLSPQNLDAIQSLRMRKVEELVSLVNEFRERGEAIDLARAS 181

  Fly   175 SLAALDVITEAAMGVQVNAQNDPDFPYIKALKSVVYIQ-----PD--RMFRFSRRYNWLFPLAAP 232
            .:.:.::|:.|...|.: |..|.:....:...:||::.     |:  ..|::.|..:........
plant   182 FVTSFNIISNALFSVDL-ATYDSNSSSYEFHNTVVHLTDIAGIPNVGDYFQYMRFLDLQGTRKKA 245

  Fly   233 LLHRQLLSDIRVMHDFTDKVISERRETVRRAKADGTYRPLSLGDAEIGSKSQMALLDILLQSSIN 297
            :|..:.|  .||..:|.|..:::|               .|..:.|....|.:.:||.||..:..
plant   246 VLCIEKL--FRVFQEFIDARLAKR---------------FSRTEKEPKEASSIDMLDSLLDLTQQ 293

  Fly   298 NQ-PLSDADIREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLGPDASAPVTQA 361
            |: .|:..|::..:......|.||.||.:..|:..:.|..|...:...|:::|:|.:..  |.::
plant   294 NEAELTMNDLKHLLLDVFVAGTDTNSSTMEWAMTELFRSTEKMVKAQSEIRQVIGQNGF--VQES 356

  Fly   362 QLQDLKYLDCVIKETMRLYPPVPAIGRHAQKELEIGDKTIPANTSIYLVLYYAHRDANYFPDPLS 426
            .:..|.||..::|||:||:|..|.|.|.::.:::|....:|.||.:.:.::...|||:.:.:|:.
plant   357 DIPSLPYLQAIVKETLRLHPAAPLIPRKSESDVQIMGFLVPKNTQVVVNVWAIGRDASVWENPMK 421

  Fly   427 FRPERFL--EDQEQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRFYE------LLPLGE 483
            |.|||||  |...:|.: |..:||.:|.:.|.|...|:..|.::::.:|..::      ::|...
plant   422 FEPERFLLRETDVKGRD-FELIPFGSGRRMCPGISMALKTMHMVLASLLYSFDWKLQNGVVPGNI 485

  Fly   484 ELKPMLNFILRSASGI 499
            ::.......|..|..:
plant   486 DMSETFGLTLHKAKSL 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 p450 34..493 CDD:278495 102/489 (21%)
CYP76C3NP_182082.2 p450 48..506 CDD:299894 100/489 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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