DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d20 and cyp4v2.2

DIOPT Version :9

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001072667.1 Gene:cyp4v2.2 / 780124 XenbaseID:XB-GENE-977085 Length:523 Species:Xenopus tropicalis


Alignment Length:546 Identity:193/546 - (35%)
Similarity:302/546 - (55%) Gaps:77/546 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWLTLITGALILLLT----------WDFGRKRQRVLAFEKSAIPGP-ISIPILGCGLQALHLGAE 54
            :|:    .|.::|||          .|:.||| |:|    ..|||| .:.|::|..|...:.|.:
 Frog    11 VWV----AAAVVLLTLLALSILPALQDYVRKR-RIL----KPIPGPGPNYPLIGDALFLKNNGGD 66

  Fly    55 NIIGWVGEKFDKYGKTFRF------WILGESLIYTKDLQYFETILSSTTLLEKGQLYEYLRPFLN 113
            ..:     :..:|.:::|.      ||.....|........|.:|||:..::|..||::|.|:|.
 Frog    67 FFL-----QICEYTESYRLQPLLKVWIGTIPFIVVYHADTVEPVLSSSKHMDKAFLYKFLHPWLG 126

  Fly   114 DGLLVSTGRKWHARRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLRKVADGKTAVDMLKYVSLAA 178
            .|||.|||.||.:|||:.|..|||.:|..::|:|:..|.::|:.|:...||: :.|....|:|.|
 Frog   127 KGLLTSTGEKWRSRRKMITPTFHFAILSEFLEVMNEQSKILVEKLQTHVDGE-SFDCFMDVTLCA 190

  Fly   179 LDVITEAAMGVQVNAQNDPDFPYIKALKSVVYIQPDRMFRFSRR-YNWLFPLAAPLLH-RQLLSD 241
            ||:|:|.|||.::.||::.|..|::|    :|...|.:.|..:. :.||..|.|.|.. ::...:
 Frog   191 LDIISETAMGRKIQAQSNRDSEYVQA----IYKMSDIIQRRQKMPWLWLDFLYAHLRDGKEHDKN 251

  Fly   242 IRVMHDFTDKVISERRETVRRAKADGTYRPLSLG-------DAEIGS---KSQMALLDILLQSSI 296
            ::::|.||||.|.||.|.:::           :|       |::..|   |.:.|.||:||.::.
 Frog   252 LKILHSFTDKAILERAEELKK-----------MGEQKKEHCDSDPESDKPKKRSAFLDMLLMATD 305

  Fly   297 N-NQPLSDADIREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLGPDASAPVTQ 360
            : ...:|..|||||||||||||.|||::.::.:|:.:..|||.|:::.:||..|.| .:..|||.
 Frog   306 DAGNKMSYMDIREEVDTFMFEGHDTTAAALNWSLFLLGSHPEAQRQVHKELDEVFG-KSDRPVTM 369

  Fly   361 AQLQDLKYLDCVIKETMRLYPPVPAIGRHAQKELEIGDKTIPANTSIYLVLYYAHRDANYFPDPL 425
            ..|:.|:||:.||||::|:||.||..||...::..|....:|...::.::.|..|||..|||:|.
 Frog   370 DDLKKLRYLEAVIKESLRIYPSVPLFGRTVTEDCSIRGFHVPKGVNVVIIPYALHRDPEYFPEPE 434

  Fly   426 SFRPERFLEDQEQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRFY---------ELLPL 481
            .||||||..:...|.|.:||:|||||.:|||||:||::|.||::|.:||.|         ||..|
 Frog   435 EFRPERFFPENASGRNPYAYIPFSAGLRNCIGQRFALMEEKVVLSSILRNYWVEASQKREELCLL 499

  Fly   482 GEELKPMLNFILRSASGINVGLRPRK 507
            ||       .|||...|:.:.|:.|:
 Frog   500 GE-------LILRPQDGMWIKLKNRE 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 p450 34..493 CDD:278495 175/487 (36%)
cyp4v2.2NP_001072667.1 p450 45..509 CDD:365848 178/492 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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