DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d20 and cyp26b1

DIOPT Version :10

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001072655.1 Gene:cyp26b1 / 780112 XenbaseID:XB-GENE-991500 Length:511 Species:Xenopus tropicalis


Alignment Length:538 Identity:126/538 - (23%)
Similarity:202/538 - (37%) Gaps:126/538 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LITGALILL-------LTWDFGRKRQRVLAFEKSAIPGPISIPILGCGLQALHLGAENIIGWV-- 60
            |::.||:|.       |.|...|.:...|...|    |.:..|::|   :..|        |:  
 Frog    19 LVSVALLLAVSQQLWQLRWAATRDKSCKLPIPK----GSMGFPLVG---ETFH--------WILQ 68

  Fly    61 GEKF-----DKYGKTFRFWILGESLIYTKDLQYFETILSSTTLLEKGQLYEYLRPFLN-DGLLVS 119
            |..|     :|||..|:..:||..||.....:....||.....|...:.....|..|. :.|..|
 Frog    69 GSDFQSSRREKYGNVFKTHLLGRPLIRVTGAENVRKILMGEHHLVSTEWPRSTRMLLGPNSLANS 133

  Fly   120 TGRKWHARRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLRKVADGKTAVDMLKYVSLAALDVITE 184
            .|.....:||:|:..|..:.||.|   :.:...|:.|.||..:....:::               
 Frog   134 IGDIHRHKRKVFSKIFSHEALESY---LPKIQLVIQDTLRVWSSNPESIN--------------- 180

  Fly   185 AAMGVQVNAQNDPDFPYIKALKSVVYIQPDRM-FRFSRRYNWLFPLAAPLLHRQLLSDIRVMHDF 248
                                    ||.:..:: ||.:.|....|.|:    ..:|....:|...|
 Frog   181 ------------------------VYCEAQKLTFRMAIRVLLGFRLS----DEELSQLFQVFQQF 217

  Fly   249 TDKVIS--------------ERRETVRRAKADGTYRPLSLGDAEIGSKSQMALLDILLQS----- 294
            .:.|.|              ..||.:.::........|.    ....|.....||||::|     
 Frog   218 VENVFSLPVDVPFSGYRRGIRAREMLLKSLEKAIQEKLQ----NTQGKDYADALDILIESGKEHG 278

  Fly   295 -SINNQPLSDADIREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQ--RVL--GPDA 354
             .:..|.|.|..:.     .:|....||:|..:..:..:.:||.|.:::.|||:  .:|  |...
 Frog   279 KELTMQELKDGTLE-----LIFAAYATTASASTSLIMQLLKHPSVLEKLREELRGNSILHNGCVC 338

  Fly   355 SAPVTQAQLQDLKYLDCVIKETMRLYPPVPAIGRHAQKELEIGDKTIPANTSIYLVLYYAHRDAN 419
            ...:....:..|.||||||||.:||:.||....|...:..|:....||...|:...:...|..|.
 Frog   339 EGALRVETISSLHYLDCVIKEILRLFSPVSGGYRTVLQTFELDGFQIPKGWSVLYSIRDTHDTAP 403

  Fly   420 YFPDPLSFRPERFLEDQ-EQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVL---ISKVLRFY---- 476
            .|.|...|.|:||.:|: |.....|.|:||..|.:||:|:..|.|.:|||   ::.:.||.    
 Frog   404 VFKDVDVFDPDRFGQDRTEDKDGRFHYLPFGGGVRNCLGKHLAKLFLKVLAIELASMSRFELATR 468

  Fly   477 ---ELLPL-----GEELK 486
               :::|:     .:|||
 Frog   469 TFPKIMPVPVVHPADELK 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 CYP4 68..501 CDD:410721 108/461 (23%)
cyp26b1NP_001072655.1 CYP26B1 60..489 CDD:410730 115/493 (23%)

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