DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d20 and Cyp4f16

DIOPT Version :9

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001343232.1 Gene:Cyp4f16 / 70101 MGIID:1917351 Length:524 Species:Mus musculus


Alignment Length:531 Identity:161/531 - (30%)
Similarity:267/531 - (50%) Gaps:58/531 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WLTLITG------ALILLLTWDFGRKRQRVLAF----EKSAIPGPISIPILGCGLQALHLGAENI 56
            |..|:.|      |.||..|:.|.....|:..|    :|:...|.:.:      :|:...|.:.:
Mouse    19 WHLLLLGVASWILARILAWTYSFYENCSRLSCFPQPPKKNWFSGHLGM------IQSNEEGMQLV 77

  Fly    57 IGWVGEKFDKYGKTFR----FWILGE--SLIYTKDLQYFETILSSTTLLEKGQL--YEYLRPFLN 113
                    .:.|:||:    || ||.  .::...|..:...:|.:..|:....:  ..:|:|:|.
Mouse    78 --------TEMGQTFQDVHLFW-LGPVIPVLRIVDPAFVAPLLQAPALVAPKDMTFLRFLKPWLG 133

  Fly   114 DGLLVSTGRKWHARRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLRKV-ADGKTAVDMLKYVSLA 177
            |||.:|:|.||...|::.|.||||.:|:.||:|.::..::|....:.: ::|...::|.:::||.
Mouse   134 DGLFLSSGDKWSRHRRLLTPAFHFDILKPYVKIFNQSVNIMHAKWKHLSSEGSARLEMFEHISLM 198

  Fly   178 ALDVITEAAMGVQVNAQNDPDFPYIKA---LKSVVYIQPDRMFRFSRRYNWLFPLAAPLLHRQLL 239
            .||.:.:...|...|.|..|. .||.|   |.|::..:..::|.|   .::|:...|.  .|:..
Mouse   199 TLDSLQKCLFGFDSNCQESPS-EYISAILELSSLIIKRSLQLFLF---VDFLYYHTAD--GRRFR 257

  Fly   240 SDIRVMHDFTDKVISERRETVRRAKADGTYRPLSLGDAEIGSKSQMALLD----ILLQSSINNQP 300
            ....::|:|||.||.|||.|:.....|...:          ||::...||    :||....:.:.
Mouse   258 KACDLVHNFTDAVIRERRHTLSSQNHDEFLK----------SKTKSKTLDFIDVLLLAKDEHGKE 312

  Fly   301 LSDADIREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLGPDASAPVTQAQLQD 365
            |||.|||.|.|||||.|.|||:|.:|..||.:|||||.|:|..:|:|.:|.......:....|..
Mouse   313 LSDEDIRAEADTFMFGGHDTTASALSWILYNLARHPEYQERCRQEVQELLRDREPEEIEWDDLAQ 377

  Fly   366 LKYLDCVIKETMRLYPPVPAIGRHAQKELEIGD-KTIPANTSIYLVLYYAHRDANYFPDPLSFRP 429
            |.:|...|||::||:.||..:.|...:::.:.| :.||......:.::..|.:.:.:|||..:.|
Mouse   378 LPFLTMCIKESLRLHSPVIDLLRRCTRDIVLPDGRVIPKGNICVISIFGIHHNPSVWPDPEVYDP 442

  Fly   430 ERFLEDQEQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRFYELLPLGEELKPMLNFILR 494
            .||..:..|..:..|::||||||:|||||.||:.||||.::..|..:.:||..:|.:.....|||
Mouse   443 FRFDPENPQKRSPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRFRILPDDKEPRRKPEIILR 507

  Fly   495 SASGINVGLRP 505
            :..|:.:.:.|
Mouse   508 AEGGLWLRVEP 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 p450 34..493 CDD:278495 145/475 (31%)
Cyp4f16NP_001343232.1 p450 52..514 CDD:306555 150/492 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845195
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.740

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