DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d20 and cyp4v2b

DIOPT Version :10

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001073465.2 Gene:cyp4v2b / 562008 ZFINID:ZDB-GENE-061103-88 Length:510 Species:Danio rerio


Alignment Length:527 Identity:181/527 - (34%)
Similarity:290/527 - (55%) Gaps:56/527 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LITGALILLLT-------------WDFGRKRQRVLAFEKSAIPGPI-SIPILGCGLQALHLGAEN 55
            |.|..|:|||.             |:           |...|||.. :.||:|..|| ....|.:
Zfish    13 LFTAVLLLLLASTAYNPLKNYIGKWN-----------EMRPIPGMAGAYPIIGNALQ-FKTNAGD 65

  Fly    56 IIGWV--GEKFDKYGKTFRFWILGESLIYTKDLQYFETILSSTTLLEKGQLYEYLRPFLNDGLLV 118
            ....:  |...:::....:.|:.....:.....:..|.:||::..|:|...|.:|.|:|..|||.
Zfish    66 FFNQIIEGTNENRHLPLAKVWVGPVPFLILYHAENIEVVLSNSRHLDKSYSYRFLHPWLGTGLLT 130

  Fly   119 STGRKWHARRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLRKVADGKTAVDMLKYVSLAALDVIT 183
            |||.||..|||:.|..|||.:|..::|:|:..:.:::..::|:.||: ..:...:::|.|||:|.
Zfish   131 STGEKWRNRRKMLTPTFHFSILSDFLEVMNEQTDILIQKMQKLEDGE-PFNCFNFITLCALDIIC 194

  Fly   184 EAAMGVQVNAQNDPDFPYIKALKSVVYIQPDRMFRFSRRYNWLFPLAAPLLHRQL------LSDI 242
            |.|||.::.||::.|..|:::    ||...|.:.: .:|..||:|   ..::.:|      ...:
Zfish   195 ETAMGKKIYAQSNADSEYVQS----VYKMSDIITK-RQRAPWLWP---DWIYNKLKEGKEHAKRL 251

  Fly   243 RVMHDFTDKVISERRETVRRAKADGTYRPLSLGDAEIGSKSQMALLDILLQSSI-NNQPLSDADI 306
            :::|.||..||.||.|.: .::.|        .|::.|.:.:.|.||:||:::. |.|.||..||
Zfish   252 KILHSFTANVIRERAEFM-SSEPD--------SDSDQGGRKRQAFLDMLLKTTYENGQKLSHEDI 307

  Fly   307 REEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLGPDASAPVTQAQLQDLKYLDC 371
            :||||||||||.|||::.::.||:.|..|||||:.:..|||.|.| .:...|....|:.|:||:|
Zfish   308 QEEVDTFMFEGHDTTAASMNWALHLIGSHPEVQKAVQAELQEVFG-SSERHVGVEDLKKLRYLEC 371

  Fly   372 VIKETMRLYPPVPAIGRHAQKELEIGDKTIPANTSIYLVLYYAHRDANYFPDPLSFRPERFLEDQ 436
            ||||::|::|.||...|...:...|....:|...:..::.|..|||..|||:|..|:||||:.:.
Zfish   372 VIKESLRIFPSVPLFARSICEACHINGFKVPKGVNAVIIPYALHRDPRYFPEPEEFQPERFMPEN 436

  Fly   437 EQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRFY--ELLPLGEELKPMLNFILRSASGI 499
            .:|.:.:||:||||||:|||||:||::|.||:::.:||.:  |.....|||:|:...|||...||
Zfish   437 SKGRHPYAYIPFSAGPRNCIGQRFAMMEEKVVLATILRHFDVEACQSREELRPLGELILRPEKGI 501

  Fly   500 NVGLRPR 506
            .:.|:.|
Zfish   502 WIKLQRR 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 CYP4 68..501 CDD:410721 161/441 (37%)
cyp4v2bNP_001073465.2 None

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