DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d20 and cyp4b1.2

DIOPT Version :10

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001017348.1 Gene:cyp4b1.2 / 550102 XenbaseID:XB-GENE-963387 Length:515 Species:Xenopus tropicalis


Alignment Length:516 Identity:178/516 - (34%)
Similarity:270/516 - (52%) Gaps:40/516 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WLTLITGALILLLTWDFGRKRQRVLAFEKSAIPGPISIPILGCGLQALHLG--AENIIGWVGEKF 64
            ::.|:...|:||..:.. ..|.|..|......|||.:..:.|...|....|  .:.::.||    
 Frog    24 FVALLCVVLLLLKAYAL-YSRGRRFAAALVPFPGPPAHWLYGHVNQFRRDGKDLDRLMVWV---- 83

  Fly    65 DKYGKTFRFWILGE---SLIYTKDLQYFETILS-STTLLEKGQLYEYLRPFLNDGLLVSTGRKWH 125
            :||...|..|| |:   :||.| |..|.:.:.. |......|  |.:|.|::..|||:.:|..|.
 Frog    84 NKYPNAFPLWI-GKFFGTLIIT-DPDYAKVVFGRSDPKTSTG--YNFLVPWIGKGLLILSGNTWF 144

  Fly   126 ARRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLRKVADGKTAVDMLKYVSLAALDVITEAAMGVQ 190
            ..|::.|..||:.||:.||.::...:.:|:|.|...::...:|::.::|||..||.|.:.|....
 Frog   145 QHRRLITPGFHYDVLKPYVSLISDSTKIMLDELDVYSNKDESVELFQHVSLMTLDSIMKCAFSYH 209

  Fly   191 VNAQNDPDFPYIKALKSVVYIQPDRMFRFSRRYNWLFPLAAPLLHR-QLLSDIRVMHDFTDKVIS 254
            .|.|.|.|..||:|:..:.::...|:..|....|.::.|:.   |. :.....|::|..|||||.
 Frog   210 SNCQTDKDNDYIQAVYDLSWLTQQRIRTFPYHSNLIYFLSP---HGFRFRKACRIVHLHTDKVIG 271

  Fly   255 ERRETVRRAKADGTYRPLSLGDAE-IGSKSQMALLDILLQS-SINNQPLSDADIREEVDTFMFEG 317
            :|::.:.           |..:.| :..|..:..|||||.| ..|.|.||..|:|.|||||||||
 Frog   272 QRKKLLE-----------SKEELEKVQKKRHLDFLDILLCSKDENGQGLSHEDLRAEVDTFMFEG 325

  Fly   318 DDTTSSGVSHALYAIARHPEVQQRIFEELQRVLGPDASAPVTQAQLQDLKYLDCVIKETMRLYPP 382
            .||||||:|..||.:|.|||.||:..||:...||...:  :....|..:.|....|||::|||||
 Frog   326 HDTTSSGISWILYCMATHPEHQQKCREEISEALGERQT--MEWDDLNRMPYTTMCIKESLRLYPP 388

  Fly   383 VPAIGRHAQKELEIGD-KTIPANTSIYLVLYYAHRDANYFPDPLSFRPERFLEDQEQGHNTFAYV 446
            ||::.|...|.:...| :::||...:.|.:|..||:.|.:.||..|.|.||..:.....::.|:|
 Frog   389 VPSVSRELAKPITFHDGRSLPAGMLVSLQIYAIHRNPNVWKDPEIFDPLRFSPENSSKRHSHAFV 453

  Fly   447 PFSAGPKNCIGQKFAVLEMKVLISKVLRFYELLPLGEELKPML---NFILRSASGINVGLR 504
            ||:|||:|||||.||:.||||.::..|:.:||.|  :..||.|   ..:|||.:||:|.|:
 Frog   454 PFAAGPRNCIGQNFAMNEMKVAVALTLKRFELSP--DLSKPPLKQPQLVLRSKNGIHVYLK 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 CYP4 68..501 CDD:410721 159/443 (36%)
cyp4b1.2NP_001017348.1 CYP4B-like 76..510 CDD:410771 163/459 (36%)

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