DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d20 and Cyp4f40

DIOPT Version :9

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_038935701.1 Gene:Cyp4f40 / 503122 RGDID:1559596 Length:530 Species:Rattus norvegicus


Alignment Length:494 Identity:161/494 - (32%)
Similarity:247/494 - (50%) Gaps:63/494 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 HLG----AENIIGWVGEKFDKYGKTFRFWILGE--SLIYTKDLQYFETILSSTTLL--EKGQLYE 106
            |||    .|..:..:.|....|.:.|..| ||.  .||.........::||::..:  :.|..|.
  Rat    63 HLGMSPPTEEGMKQMTELVATYPQGFMTW-LGPIVPLITLCHPDIIRSVLSASAAVAPKDGIFYS 126

  Fly   107 YLRPFLNDGLLVSTGRKWHARRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLRKVADGKTA-VDM 170
            :|:|:|.||||||...||...|.:.|.||||.:|:.||:|.:..:::|.....::|.|.:| :||
  Rat   127 FLKPWLGDGLLVSASDKWSRHRSMLTPAFHFNILKPYVKIFNDSTNIMHAKWLRLASGGSAHLDM 191

  Fly   171 LKYVSLAALDVITEAAMGVQVNAQNDPDFPYIKA---LKSVVYIQPDRMFRFSRRYNWLFPLAAP 232
            .:.:||..||.:.:.......|.|..|. .||.|   |.::|..:.:::                
  Rat   192 FENISLMTLDTLQKCVFSFNSNCQEKPS-EYIAAILELSALVVKRNEQL---------------- 239

  Fly   233 LLHRQLLSDI-----------RVMHDFTDKVISERRETVRRAKADGTYRPLSLGDAEIGSKSQMA 286
            |||..||..:           .::||||..||.|||.|:          |...||..|.:|::..
  Rat   240 LLHMDLLYRLTPDGRRFYKACHLVHDFTYAVIQERRRTL----------PKHGGDDVIKAKAKSK 294

  Fly   287 LLD----ILLQSSINNQPLSDADIREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQ 347
            .||    :||....:.:.|||.|||.|.|||||||.|||:||:|..||.:|:|||.|:|..:|:|
  Rat   295 TLDFIDVLLLSKDEDGKELSDEDIRAEADTFMFEGHDTTASGLSWILYNLAKHPEYQERCRQEVQ 359

  Fly   348 RVLGPDASAPV-------TQAQLQDLKYLDCVIKETMRLYPPVPAIGRHAQKELEIGD-KTIPAN 404
            .:|....|..:       .:..|..|.:|...|||::||:|||..:.|...:::.:.| :.||..
  Rat   360 ELLRDRDSEEIECSCGVLLRDDLAQLPFLTMCIKESLRLHPPVTMVSRCCTQDISLPDGRVIPKG 424

  Fly   405 TSIYLVLYYAHRDANYFPDPLSFRPERFLEDQEQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLI 469
            ....:.::..|.:...:.||..:.|.||..:..|..:..|::||||||:|||||.||:.||||.:
  Rat   425 IICIINIFATHHNPTVWQDPEVYDPFRFDPENIQARSPLAFIPFSAGPRNCIGQTFAMNEMKVAV 489

  Fly   470 SKVLRFYELLPLGEELKPMLNFILRSASGINVGLRPRKA 508
            :..|..:.:||..:|.:.....|||:..|:.:.:.|..|
  Rat   490 ALTLLRFRVLPDDKEPRRKPELILRAEDGLWLRVEPLSA 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 p450 34..493 CDD:278495 155/477 (32%)
Cyp4f40XP_038935701.1 CYP4F 74..522 CDD:410772 155/475 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348643
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

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