DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d20 and Cyp4f40

DIOPT Version :10

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001102830.1 Gene:Cyp4f40 / 503122 RGDID:1559596 Length:523 Species:Rattus norvegicus


Alignment Length:487 Identity:161/487 - (33%)
Similarity:246/487 - (50%) Gaps:56/487 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 HLG----AENIIGWVGEKFDKYGKTFRFWILGE--SLIYTKDLQYFETILSSTTLL--EKGQLYE 106
            |||    .|..:..:.|....|.:.|..| ||.  .||.........::||::..:  :.|..|.
  Rat    63 HLGMSPPTEEGMKQMTELVATYPQGFMTW-LGPIVPLITLCHPDIIRSVLSASAAVAPKDGIFYS 126

  Fly   107 YLRPFLNDGLLVSTGRKWHARRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLRKVADGKTA-VDM 170
            :|:|:|.||||||...||...|.:.|.||||.:|:.||:|.:..:::|.....::|.|.:| :||
  Rat   127 FLKPWLGDGLLVSASDKWSRHRSMLTPAFHFNILKPYVKIFNDSTNIMHAKWLRLASGGSAHLDM 191

  Fly   171 LKYVSLAALDVITEAAMGVQVNAQNDPDFPYIKA---LKSVVYIQPDRMFRFSRRYNWLFPLAAP 232
            .:.:||..||.:.:.......|.|..|. .||.|   |.::|..:.:::                
  Rat   192 FENISLMTLDTLQKCVFSFNSNCQEKPS-EYIAAILELSALVVKRNEQL---------------- 239

  Fly   233 LLHRQLLSDI-----------RVMHDFTDKVISERRETVRRAKADGTYRPLSLGDAEIGSKSQMA 286
            |||..||..:           .::||||..||.|||.|:          |...||..|.:|::..
  Rat   240 LLHMDLLYRLTPDGRRFYKACHLVHDFTYAVIQERRRTL----------PKHGGDDVIKAKAKSK 294

  Fly   287 LLD----ILLQSSINNQPLSDADIREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQ 347
            .||    :||....:.:.|||.|||.|.|||||||.|||:||:|..||.:|:|||.|:|..:|:|
  Rat   295 TLDFIDVLLLSKDEDGKELSDEDIRAEADTFMFEGHDTTASGLSWILYNLAKHPEYQERCRQEVQ 359

  Fly   348 RVLGPDASAPVTQAQLQDLKYLDCVIKETMRLYPPVPAIGRHAQKELEIGD-KTIPANTSIYLVL 411
            .:|....|..:....|..|.:|...|||::||:|||..:.|...:::.:.| :.||......:.:
  Rat   360 ELLRDRDSEEIEWDDLAQLPFLTMCIKESLRLHPPVTMVSRCCTQDISLPDGRVIPKGIICIINI 424

  Fly   412 YYAHRDANYFPDPLSFRPERFLEDQEQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRFY 476
            :..|.:...:.||..:.|.||..:..|..:..|::||||||:|||||.||:.||||.::..|..:
  Rat   425 FATHHNPTVWQDPEVYDPFRFDPENIQARSPLAFIPFSAGPRNCIGQTFAMNEMKVAVALTLLRF 489

  Fly   477 ELLPLGEELKPMLNFILRSASGINVGLRPRKA 508
            .:||..:|.:.....|||:..|:.:.:.|..|
  Rat   490 RVLPDDKEPRRKPELILRAEDGLWLRVEPLSA 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 CYP4 68..501 CDD:410721 153/456 (34%)
Cyp4f40NP_001102830.1 CYP4F 74..515 CDD:410772 155/468 (33%)

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