DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d20 and sad

DIOPT Version :9

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_650123.1 Gene:sad / 44858 FlyBaseID:FBgn0003312 Length:520 Species:Drosophila melanogaster


Alignment Length:573 Identity:126/573 - (21%)
Similarity:228/573 - (39%) Gaps:135/573 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WLT-LITGALILLLTWDFGRKR------QR--------VLAFEKSAIPGPISIPILGCGLQALHL 51
            ||. |:...|:.:|:....|.|      ||        .:|.:...||....:|::|..:..:..
  Fly    13 WLRHLLDQLLVRILSLSLFRSRCDPPPLQRFPATELPPAVAAKYVPIPRVKGLPVVGTLVDLIAA 77

  Fly    52 -GAENIIGWVGEKFDKYGKTFRFWILGESLIYTKDLQYFETILSSTTLL-----EKGQLYEYLRP 110
             ||.::..::..:..:||..||     |.|..|:|..:    :||..|:     .:||..::..|
  Fly    78 GGATHLHKYIDARHKQYGPIFR-----ERLGGTQDAVF----VSSANLMRGVFQHEGQYPQHPLP 133

  Fly   111 ----FLND------GLLVSTGRKWHARRKIFTHAFHFKVLEHYVEIMDRH----SSVMVDNLRKV 161
                ..|.      ||....|.:|...|:|....    :|...:..||.|    :..|||..::.
  Fly   134 DAWTLYNQQHACQRGLFFMEGAEWLHNRRILNRL----LLNGNLNWMDVHIESCTRRMVDQWKRR 194

  Fly   162 ADGKTAVDMLKYVSLA--------------ALDVITEAAMGVQV----NAQNDPDFPYIKALKSV 208
            .....|:.:.:...:.              :::|:.....|..|    ..|:..|:     ...:
  Fly   195 TAEAAAIPLAESGEIRSYELPLLEQQLYRWSIEVLCCIMFGTSVLTCPKIQSSLDY-----FTQI 254

  Fly   209 VYIQPDRMFRFSRRYNWLFPLAAPLLHRQLLSDIRVMHDF---TDKVISER----------RETV 260
            |:    ::|..|.|.....|..|.:|.      :.:..||   .|:|:.|.          :|..
  Fly   255 VH----KVFEHSSRLMTFPPRLAQILR------LPIWRDFEANVDEVLREGAAIIDHCIRVQEDQ 309

  Fly   261 RRAKADGTYRPLSLGDAEIGSKSQMALLDILLQSSINNQPLSDADIREEVDTFMFEGDDTTSSGV 325
            ||...:..|..|...|.. |...:...:|:::.:.                       |||:...
  Fly   310 RRPHDEALYHRLQAADVP-GDMIKRIFVDLVIAAG-----------------------DTTAFSS 350

  Fly   326 SHALYAIARHPEVQQRIFEELQRVLGPDASAPVTQAQLQDLKYLDCVIKETMRLYPPVPAIGRHA 390
            ..||:|:::.|.:|||:.:|               ....|.:.:..:|||::||||..|.|||:.
  Fly   351 QWALFALSKEPRLQQRLAKE---------------RATNDSRLMHGLIKESLRLYPVAPFIGRYL 400

  Fly   391 QKELEIGDKTIPANTSIYLVLYYAHRDANYFPDPLSFRPERF-LEDQEQGHNTFAYVPFSAGPKN 454
            .::.::|...|..:|.:.|.||.|.||.::|..|....|||: :.:.||.|.:...:||:.|.::
  Fly   401 PQDAQLGGHFIEKDTMVLLSLYTAGRDPSHFEQPERVLPERWCIGETEQVHKSHGSLPFAIGQRS 465

  Fly   455 CIGQKFAVLEMKVLISKVLRFYELLPLGE-ELKPMLNFILRSASGINVGLRPR 506
            |||::.|:.::..|:.:....:|:..|.| .:..:|..:......:.:.||||
  Fly   466 CIGRRVALKQLHSLLGRCAAQFEMSCLNEMPVDSVLRMVTVPDRTLRLALRPR 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 p450 34..493 CDD:278495 111/511 (22%)
sadNP_650123.1 p450 63..497 CDD:299894 109/500 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24291
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.