DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d20 and cyp-25A3

DIOPT Version :9

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001040850.1 Gene:cyp-25A3 / 4363046 WormBaseID:WBGene00014697 Length:502 Species:Caenorhabditis elegans


Alignment Length:541 Identity:137/541 - (25%)
Similarity:240/541 - (44%) Gaps:82/541 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LTLITGALILLLTWDFGRKRQRVLAFEKSAIPGPISIPILGCGLQALH----LGAENIIGWVGEK 63
            ||.|..:|:..:.:....:::|.....|..:.||....::|...|.:.    ||.::...|..:.
 Worm     6 LTSILVSLVSFIIYVILARKERFRLRGKIGLSGPEPHWLMGNLKQIIERKAKLGYDDSYDWYNKL 70

  Fly    64 FDKYGKTFRFWILGESLIYTKDLQYFETILSSTTLLEKGQLYEYLRPF----------------L 112
            ..::|:||..              ||.|.|:.....|:.....:::.|                |
 Worm    71 HKQFGETFGI--------------YFGTQLNINITNEEDIKEVFIKNFSNFSDRTPPPIIEDNKL 121

  Fly   113 NDGLLVSTGRK-WHARRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLRKVADGKTAVDMLKYVSL 176
            .:.||.:|... |...|......|....::...|.:.....:.::.|::.|......|:......
 Worm   122 KESLLQNTYESGWKHTRSAIAPIFSTGKMKAMHETIHSKVDLFLEILKEKASSGQKWDIYDDFQG 186

  Fly   177 AALDVITEAAMGVQVNAQND-PDFPYIKALKSVVYIQPDRMFRFSR--RYNWLFPLAAPLLHRQL 238
            ..||||.:.|..:..|.|.| .|..|:.|.|.:..|.    .|.|:  ..::|||..:.|.    
 Worm   187 LTLDVIGKCAFAIDSNCQRDRNDVFYVNARKFITNID----IRHSKIISTSFLFPELSKLW---- 243

  Fly   239 LSDIRVMHDFTDKVISERRETVRRAKADGTYRPLSLGDAEI--------GSKSQMALLDILL-QS 294
                :|::.|||           .|||:   .||..|.|::        ||.| :.||.:|| :.
 Worm   244 ----KVLYRFTD-----------LAKAE---IPLVEGLADVYERRRGGEGSDS-VDLLKLLLNRE 289

  Fly   295 SINNQPLSDADIREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLGPDASAPVT 359
            ...::|::..::.|....|:..|.:|||:.:::..|.::::|.|||:::||   ::....:..:|
 Worm   290 DDKSKPMTKQEVIENCFAFLLAGYETTSTAMTYCSYLLSKYPNVQQKLYEE---IMEAKENGGLT 351

  Fly   360 QAQLQDLKYLDCVIKETMRLYPPVPAI-GRHAQKELEIGDKTIPANTSIYLVLYYAHRDANYFPD 423
            ...:.::||||.|.|||:|.||||... .|...|::.|..:..|....:..:.:..||:...:..
 Worm   352 YDSIHNMKYLDYVYKETLRCYPPVIHFSNRRCLKDITIRGQFYPKGAIVVCLPHTVHRNPENWDS 416

  Fly   424 PLSFRPERFLEDQEQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRFYELLPL-GE-ELK 486
            |..|.|||| |:.|:..::..::||..||:.|:|.:||.:|.|..|:|:|..:||... || :|.
 Worm   417 PEEFHPERF-ENWEEKSSSLKWIPFGVGPRYCVGMRFAEMEFKTTIAKLLDTFELKQFEGEADLI 480

  Fly   487 PMLN-FILRSASGINVGLRPR 506
            |..| .|:|....:.:.|:||
 Worm   481 PDCNGVIMRPKDPVRLHLKPR 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 p450 34..493 CDD:278495 126/495 (25%)
cyp-25A3NP_001040850.1 p450 37..496 CDD:278495 128/503 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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