DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d20 and Cyp313a3

DIOPT Version :10

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_650170.2 Gene:Cyp313a3 / 41488 FlyBaseID:FBgn0038007 Length:492 Species:Drosophila melanogaster


Alignment Length:534 Identity:141/534 - (26%)
Similarity:228/534 - (42%) Gaps:88/534 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LTLITGALI-LLLTWDFGRKRQRVLAFEKSAIPGPISIPILGCGLQALHLGAENIIGW-----VG 61
            |.|..|... :...|  .|:|..::.|:   ||||:.:||||       :..|.:|.:     :.
  Fly     6 LLLAVGVCFWIYFLW--SRRRLYMMHFK---IPGPMGLPILG-------IAFEYLITYKRKMSIR 58

  Fly    62 EKF-DKYGKTFRFWILGESLIYTKDLQYFETILSSTTLLEKGQLYEYLRPF---LNDGLLVSTGR 122
            .|: |.||.|...|:.....:.|:|.:..|.|..|...|.:..::.  :|.   ..||||.....
  Fly    59 TKYMDIYGSTCLVWVGPTPFVITRDPKIAEEIFLSPECLNRSSIFS--KPVNSCTGDGLLSLEAS 121

  Fly   123 KWHARRKIFTHAFHFKVLEHYVEIMDRHSSVMV---DNLRKVADGKTAVDMLKYVSLAALDVITE 184
            ||..|||....||...||..::.|.:..:..:|   |:|....:.|...|::::    :..:.|:
  Fly   122 KWVDRRKNLNPAFKQNVLLSFLPIFNSEAKTLVAFLDSLVGQGEKKVRDDIVRW----SFRIATQ 182

  Fly   185 AAMGVQVNAQNDPDFPYIKALKSVVYIQPDRMFRFSRRYNWLFPLAA-----PLLHRQLLSDIRV 244
            ..:|..|  :.|..|.....|||               |.....:..     |..|.::.|.:..
  Fly   183 TTVGTDV--KKDASFKNDSVLKS---------------YETFMKIIVMNVLLPFTHNKIFSTLGG 230

  Fly   245 MHDFTDKVISERRETVRRAKADGTY-------RPLSLGDAEIGSKSQMALLDILLQSSINNQPLS 302
            ..  |.|.:::....    |..||.       :|.|....||.|....|:      ....|..:|
  Fly   231 FE--TQKALAKSNVN----KMIGTIVDKKLMTKPESGSQPEITSVINKAI------ELHRNGEMS 283

  Fly   303 DADIREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLGPDASAPVTQAQLQDLK 367
            ..:::.|..:|:....:||...|.|||..:|..||.|..:::||:.:........||...||.:.
  Fly   284 REEVQSECCSFVVAAFETTGDTVYHALILLAMFPEHQDTVYQELKELFPVAGDFEVTYDDLQRMV 348

  Fly   368 YLDCVIKETMRLYPPVPAIGRHAQKELEIGD-KTIPANTSIYLVLYYAHRDANYF-PDPLSFRPE 430
            :|:.|:.||:||.|.||...|...::..:.. ..||....|.:.::..||:.::: .||.||.|:
  Fly   349 FLERVVNETLRLIPSVPFTPRETIRDFRLSSGVVIPKGVGIGIDIFATHRNRDHWGTDPSSFNPD 413

  Fly   431 RFLEDQEQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLR--------FYELLP----LGE 483
            .||.|..:..:.:||:|||.|.:||||.|:.::..|:.:||:||        .||.|.    :|.
  Fly   414 HFLPDNVRDRHPYAYIPFSKGRRNCIGWKYGLMSSKLALSKILRNCKVSTSFRYEDLEFVDNIGM 478

  Fly   484 EL--KPMLNFILRS 495
            ||  .|.|.|..|:
  Fly   479 ELAQSPGLEFHRRT 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 CYP4 68..501 CDD:410721 121/462 (26%)
Cyp313a3NP_650170.2 CYP313-like 66..487 CDD:410680 118/455 (26%)

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