DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d20 and cyp46a1.2

DIOPT Version :10

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_956755.3 Gene:cyp46a1.2 / 393433 ZFINID:ZDB-GENE-040426-1184 Length:501 Species:Danio rerio


Alignment Length:454 Identity:127/454 - (27%)
Similarity:209/454 - (46%) Gaps:53/454 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 DKYGKTFRFWILGESLIYTKDLQYFETILSSTTLLEKGQLYEYL-----RPFLNDGLLVSTGRK- 123
            ::||..:|...|....|.....:..:|||.|....:....|..|     :.||.:||:.:.... 
Zfish    74 EQYGPVYRINTLHYIAIVVHCPEATKTILMSPKYAKDPFSYSRLFNLFGKRFLGNGLVTAVDHDI 138

  Fly   124 WHARRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLRKVADGKTAVDMLKYVSLAALDVITEAAMG 188
            |:.:|:|...||....|...:...|..|..::|.|.::|:.||...|...|:...||||.:.|.|
Zfish   139 WYRQRRIMDPAFSSSYLRSLISTFDEMSERLMDKLEEMANNKTPAVMHDLVNCVTLDVICKVAFG 203

  Fly   189 VQVNAQNDPDFPYIKA----LKSVVYIQPDRMFRFSRRYNWLFPLAAPLLHRQLLSDIR----VM 245
            |.:|.....|.|:..|    |..:.....|.:||...: ||           :|:..||    ::
Zfish   204 VDLNFLAQKDSPFQNAVELCLNGMALDARDPLFRIFPK-NW-----------KLIQQIRDAAVLL 256

  Fly   246 HDFTDKVISERRETVRRAKADGTYRPLSLGDAEIGSKSQMALLDILLQSSINNQPLSDADIREEV 310
            ....:|.|..|:..|:..:             ::.......:|.|..:.::|    |..|:.:.:
Zfish   257 RKTGEKWIQNRKTAVKNGE-------------DVPKDILTQILKIAEEENVN----SSEDLEQMM 304

  Fly   311 D---TFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLGPDASAPVTQAQLQDLKYLDCV 372
            |   ||...|.:||::.:|.|:.|:.|:||:.:|...|:..|||  ....::...|..|.||..|
Zfish   305 DNFVTFFIAGQETTANQLSFAIMALGRNPEIYKRAKAEVDEVLG--TKREISNEDLGKLTYLSQV 367

  Fly   373 IKETMRLYPPVPAIGRHAQKELEIGDKTIPANTSIYLVLYYAHRDANYFPDPLSFRPERFLEDQE 437
            :|||:||||..|...|...:::.|....||...|:....:.:.|...:|.|||.|.||||.|:..
Zfish   368 LKETLRLYPTAPGTNRWLHEDMIINGIKIPGGCSVMFSSFVSQRLEKFFKDPLKFDPERFDENAP 432

  Fly   438 QGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRFYE--LLPLGEELKPMLNFILRSASGI 499
            :.:  :.|.||:.||:.|:||.|:.:|.||:::|:|:.:|  |:| |:.........||..||:
Zfish   433 KPY--YCYYPFALGPRTCLGQVFSQMEAKVVLAKLLQRFEFSLVP-GQSFDIKDTGTLRPKSGV 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 CYP4 68..501 CDD:410721 126/451 (28%)
cyp46a1.2NP_956755.3 None

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