DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d20 and Cyp301a1

DIOPT Version :10

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_610796.1 Gene:Cyp301a1 / 36378 FlyBaseID:FBgn0033753 Length:553 Species:Drosophila melanogaster


Alignment Length:504 Identity:126/504 - (25%)
Similarity:208/504 - (41%) Gaps:93/504 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 QRVLAFEKSAIPGPISIPILGCGLQALHLGAENIIGWVGE----KFDKYGKTFRF-WILGE-SLI 81
            |..|.:.:  ||||..|||||...:.:.:..:..|..|.:    ..|:||:..|| .::|. .|:
  Fly    67 QNALPYNQ--IPGPKPIPILGNTWRLMPIIGQYTISDVAKISSLLHDRYGRIVRFGGLIGRPDLL 129

  Fly    82 YTKDLQYFETILSSTTLLEKG---------QLYEY----LRPFLND--GLLVSTGRKWHA-RRKI 130
            :..|....|....|     :|         .|.:|    .:.|..|  |::...|..|.. |.::
  Fly   130 FIYDADEIEKCYRS-----EGPTPFRPSMPSLVKYKSVVRKDFFGDLGGVVGVHGEPWREFRSRV 189

  Fly   131 FTHAFHFKVLEHYVEIMD--------RHSSVMVDN--LRKVADGKTAVDMLKYVSLAALDVITEA 185
            .........:..|::.::        |..:::.:|  |.:..|.:.....|:.:...|||    .
  Fly   190 QKPVLQLSTIRRYLQPLEVITEDFLVRCENLLDENQELPEDFDNEIHKWSLECIGRVALD----T 250

  Fly   186 AMG-VQVNAQNDPDFPYI-----KALKSVVYIQPDRMFRFSRRYNWLFPLAAPLLHRQLLSDIRV 244
            .:| ::.|.:.|.:...|     .||::|..::      ....|...||  .||..|.    ::.
  Fly   251 RLGCLESNLKPDSEPQQIIDAAKYALRNVATLE------LKAPYWRYFP--TPLWTRY----VKN 303

  Fly   245 MHDFTDKVISERRETVRRAKADGTYRP-LSLGDAEIGSKSQMALLDILLQSSINNQPLSDADIRE 308
            |:.|....:...:....|.|   |..| |..|:..:..|..::..|                  |
  Fly   304 MNFFVGVCMKYIQSATERLK---TQDPSLRAGEPSLVEKVILSQKD------------------E 347

  Fly   309 EVDTFM-----FEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLGPDASAPVTQAQLQDLKY 368
            ::.|.|     ..|.||.|..|...||.:|..|..||::.|||:|:| ||.:.|:|...|..:.:
  Fly   348 KIATIMALDLILVGIDTISMAVCSMLYQLATRPVDQQKVHEELKRLL-PDPNTPLTIPLLDQMHH 411

  Fly   369 LDCVIKETMRLYPPVPAIGRHAQKELEIGDKTIPANTSIYLVLYYAHRDANYFPDPLSFRPERFL 433
            |...|||..|:|..|...||...::..|....:|.................|..|..:|||||:|
  Fly   412 LKGFIKEVFRMYSTVIGNGRTLMEDSVICGYQVPKGVQAVFPTIVTGNMEEYVTDAATFRPERWL 476

  Fly   434 EDQEQGH----NTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRFYEL 478
            :.|..|.    :.||.:|:..|.:.|:|::||.|||::|::|:||.|:|
  Fly   477 KPQHGGTPGKLHPFASLPYGYGARMCLGRRFADLEMQILLAKLLRNYKL 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 CYP4 68..501 CDD:410721 111/455 (24%)
Cyp301a1NP_610796.1 CYP24A1-like 110..547 CDD:410677 113/459 (25%)

Return to query results.
Submit another query.