DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d20 and Cyp46a1

DIOPT Version :9

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_006240610.1 Gene:Cyp46a1 / 362782 RGDID:1306605 Length:500 Species:Rattus norvegicus


Alignment Length:541 Identity:142/541 - (26%)
Similarity:239/541 - (44%) Gaps:96/541 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LITGALILLLTWDFG-------RKRQRVLAFEKSAIPGPISIP----ILG-----------CG-- 45
            |:.|:.:||.   ||       |.|.|   :|.  ||||   |    :||           ||  
  Rat     6 LLLGSAVLLA---FGLCCTFVHRARSR---YEH--IPGP---PRPSFLLGHLPYFWKKDEACGRV 59

  Fly    46 LQALHLGAENIIGWVGEKFDKYGKTFRFWILGESLIYTKDLQYFETILSSTTLLEKGQLYEYLRP 110
            ||.:.|      .|.    .|||...|..:..::.:.....:..:..|.||...:..::|..::.
  Rat    60 LQDVFL------DWA----KKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRAIQT 114

  Fly   111 FLNDGL----LVST---GRKWHARRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLRKVADGKTAV 168
            ...:.|    |||.   || |:.:|::...||....|...:...:..:..:::.|...|||:|.|
  Rat   115 VFGERLFGQGLVSECDYGR-WYKQRRVMDLAFSRSSLVSLMGTFNEKAEQLMEILEAKADGQTPV 178

  Fly   169 DMLKYVSLAALDVITEAAMGVQVNAQNDPDFPYIKALKSV---VYIQPDRMFRFSRRYNWLFPLA 230
            .|...::.|.:|::.:||.|::.:.......|..:|:|.:   :....:.:.:|       .|..
  Rat   179 SMQDMLTCATIDILAKAAFGMETSMLLGAQKPLSQAVKVMLEGISASRNTLAKF-------MPGK 236

  Fly   231 APLLHRQLLSDIRVMHDFTDKVISERRETVRRAK---ADGTYRPLSLGDAEIGSKSQMALLDILL 292
            ...| |::...||::.......:..|||.::|.:   ||...:.|.   ||.|::....|||..:
  Rat   237 RKQL-REIRESIRLLRQVGKDWVQRRREALKRGEDVPADILTQILK---AEEGAQDDEVLLDNFV 297

  Fly   293 QSSINNQPLSDADIREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLGPDASAP 357
                               ||...|.:|:::.::..:..::|.||:..|:..|:..|:|  :...
  Rat   298 -------------------TFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVVG--SKRH 341

  Fly   358 VTQAQLQDLKYLDCVIKETMRLYPPVPAIGRHAQKELEIGDKTIPANTSIYLVLYYAHRDANYFP 422
            :....|..|:||..|:||::|||||.....|..::|..|....:|.||.:....|...|...||.
  Rat   342 LDYEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFE 406

  Fly   423 DPLSFRPERFLEDQEQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRFYE--LLPLGEEL 485
            |||:|.|:||.....:..  |.|.|||.|.::||||:||.:|:||:::|:|:..|  |:| |:..
  Rat   407 DPLTFNPDRFGPGAPKPR--FTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVP-GQRF 468

  Fly   486 KPMLNFILRSASGINVGLRPR 506
            .......|:....:...||||
  Rat   469 GLQEQATLKPLDPVLCTLRPR 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 p450 34..493 CDD:278495 126/490 (26%)
Cyp46a1XP_006240610.1 p450 34..466 CDD:278495 125/480 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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