DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d20 and CYP26C1

DIOPT Version :9

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_899230.2 Gene:CYP26C1 / 340665 HGNCID:20577 Length:522 Species:Homo sapiens


Alignment Length:529 Identity:133/529 - (25%)
Similarity:201/529 - (37%) Gaps:129/529 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LITGALILL------LTWDFGRKRQRVLAFEKSAIPGPISIPILGCGLQALHLGAENIIGWV--G 61
            |..|.|:.|      |.|...|.|...|...|    |.:..|..|   :.||        |:  |
Human    20 LCAGLLLSLAQHLWTLRWMLSRDRASTLPLPK----GSMGWPFFG---ETLH--------WLVQG 69

  Fly    62 EKF-----DKYGKTFRFWILGESLIYTKDLQYFETILSSTTLLEKGQLYEYLRPFL-NDGLLVST 120
            .:|     ::||..|:..:||..:|.....:...|||.....|.:.|..:.....| :..||.:.
Human    70 SRFHSSRRERYGTVFKTHLLGRPVIRVSGAENVRTILLGEHRLVRSQWPQSAHILLGSHTLLGAV 134

  Fly   121 GRKWHARRKIFTHAFHFKVLEHYVEIMD---RH---------SSVMVDNLRKVADGKTAVDMLKY 173
            |.....|||:....|....||.||..:.   ||         ..|.|.:..|....:.|..:|..
Human   135 GEPHRRRRKVLARVFSRAALERYVPRLQGALRHEVRSWCAAGGPVSVYDASKALTFRMAARILLG 199

  Fly   174 VSLAALDVITEAAMGVQV--NAQNDP-DFPYIKALKSVVYIQPDRMFRFSRRYNWLFPLAAPLLH 235
            :.|......|.|....|:  |..:.| |.|:....|.:                    .|...||
Human   200 LRLDEAQCATLARTFEQLVENLFSLPLDVPFSGLRKGI--------------------RARDQLH 244

  Fly   236 RQLLSDIRVMHDFTDKVISERRETVRRAKADGTYRPLSLGDAEIGSKSQMALLDILLQSS--INN 298
            |.|           :..|||:....:.|:.         |||          ||:::.|:  :.:
Human   245 RHL-----------EGAISEKLHEDKAAEP---------GDA----------LDLIIHSARELGH 279

  Fly   299 QPLSDADIREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEE-----LQRVLG------- 351
            :| |..:::|.....:|....||:|..:..:..:.:||....:|.||     |.|..|       
Human   280 EP-SMQELKESAVELLFAAFFTTASASTSLVLLLLQHPAAIAKIREELVAQGLGRACGCAPGAAG 343

  Fly   352 ------PDASA--PVTQAQLQDLKYLDCVIKETMRLYPPVPAIGRHAQKELEIGDKTIPANTSIY 408
                  ||...  .::.|.|..|:|:|||:||.:||.|||....|.|.:..|:....||...|: 
Human   344 GSEGPPPDCGCEPDLSLAALGRLRYVDCVVKEVLRLLPPVSGGYRTALRTFELDGYQIPKGWSV- 407

  Fly   409 LVLYYAHRD-----ANYFPDPLSFRPERF---LEDQEQGHNTFAYVPFSAGPKNCIGQKFAVLEM 465
               .|:.||     |.|...|..|.||||   .||.....:.|.|:||..|.::|:||:.|...:
Human   408 ---MYSIRDTHETAAVYRSPPEGFDPERFGAAREDSRGASSRFHYIPFGGGARSCLGQELAQAVL 469

  Fly   466 KVLISKVLR 474
            ::|..:::|
Human   470 QLLAVELVR 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 p450 34..493 CDD:278495 123/494 (25%)
CYP26C1NP_899230.2 p450 40..504 CDD:299894 127/509 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5309
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.860

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