DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d20 and LOC3290579

DIOPT Version :10

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_061502574.1 Gene:LOC3290579 / 3290579 VectorBaseID:AGAMI1_012923 Length:507 Species:Anopheles gambiae


Alignment Length:197 Identity:32/197 - (16%)
Similarity:75/197 - (38%) Gaps:47/197 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 EALALDSEHSFNGFSVKKAE---DVVNIMVGRGYALGKDAMEKAKAFDDRHNLISNASATI---- 166
            |.:.:|.:.:|..:..|:.|   .|:.::.|.||:    |:..|....:..::|......|    
Mosquito    49 EDVTVDEQRTFRIYRTKQPEKPGPVLLLLHGGGYS----ALTWAHFCSEVTSMIHCQCLCIDMRG 109

  Fly   167 ---ASLDDKMGLSEKL---SIGTTVVNEKLRDIDERYQVREITKSALA----------------- 208
               :.:||:..||...   .||..::.....::.:.:.|......|:|                 
Mosquito   110 HGDSKVDDEDDLSADTLAKDIGDLILKLYPEEVPQLFVVGHSMGGAIAVHFAHMALVPNLIGITV 174

  Fly   209 --AAEETAISARTALMANPYVSSGASWFSNAFGAVTKAVKEKVENGGEGRKEIITLDPSSPKVPA 271
              ..|.||:.|..::.:  ::.|...:|.    ::..|::..:.:|     ::..:|.:...:|.
Mosquito   175 IDVVEGTAMEALASMQS--FLRSRPKYFQ----SIPNAIEWCIRSG-----QVRNVDSAKVSMPG 228

  Fly   272 VV 273
            .:
Mosquito   229 QI 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 CYP4 68..501 CDD:410721 32/197 (16%)
LOC3290579XP_061502574.1 None

Return to query results.
Submit another query.