DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d20 and Cyp20a1

DIOPT Version :9

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_955433.1 Gene:Cyp20a1 / 316435 RGDID:735221 Length:462 Species:Rattus norvegicus


Alignment Length:534 Identity:119/534 - (22%)
Similarity:208/534 - (38%) Gaps:114/534 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WLTLITGALILLLTWDFGRKRQRVLAFEKSAIPG--PI-----SIP-ILGCGLQALHLGAENIIG 58
            :|..:.||::.|    :...||      .|.|||  |.     ::| |:..|  :||....|:.|
  Rat    11 FLLALVGAVLYL----YPASRQ------ASGIPGLTPTEEKDGNLPDIVNSG--SLHEFLVNLHG 63

  Fly    59 WVGEKFDKYGKTFRFWILGESLIYT--------------KDLQYFETILSSTTLLEKGQLYEYLR 109
                   :||....|| .|..|:.:              |.|..|||:|.|......|       
  Rat    64 -------RYGPVVSFW-FGRRLVVSLGTADALKQHFNPNKTLDPFETMLKSLLGYRSG------- 113

  Fly   110 PFLNDGLLVSTGRKWHARRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLRKVADGKTAVDMLKYV 174
                    ..:|.:.|.||:::..|. ...|:....::.:.|..::|......:.: .:.:.:::
  Rat   114 --------AGSGSEDHVRRRLYGDAV-TAALQSNFPLLLKLSEELLDKWLSYPETQ-HIPLSQHM 168

  Fly   175 SLAALDVITEAAMGVQVNAQNDPDFPYIKALKSVVYIQPDRMFRFSRRYNWLFPLAAPLLHRQLL 239
            ...||..:|...:|.....:.:                   :.||.:            :|..:.
  Rat   169 LGFALKFVTRMVLGDTFEGEQE-------------------VIRFQK------------IHGTVW 202

  Fly   240 SDIRVMHDFTDKVISERRETVRRAKADGTYRPLS------LGDAEIGSKSQMALLDILLQSSINN 298
            |:|.  ..|.|..:.  :.|.|:.:.......|.      :.:.:.|..||...:|.|:|.::|.
  Rat   203 SEIG--KGFLDGSLD--KNTTRKNQYQEALMQLEAILKKIIKERKGGDFSQHTFIDSLVQRNLNE 263

  Fly   299 QPLSDADIREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLGPDASAPVTQAQL 363
            |     .|.|:...|...|...|:...:.|::.:....|||:::.:|:..|||   ..|:|..::
  Rat   264 Q-----QILEDSVVFSLAGCIVTARLCTWAIHFLTTAEEVQKKLHKEVDHVLG---KGPITSEKI 320

  Fly   364 QDLKYLDCVIKETMRLYPPVPAIGRHAQKELEIGDKTIPANTSIYLVLYYAHRDANYFPDPLSFR 428
            :.|:|...|:.||:|.....|...:....|.::|...||..|.:...|....:||:.:|.|..|.
  Rat   321 EQLRYCQQVLCETVRTAKLTPVSAQLQDIEGKVGPFIIPKETLVLYALGVVLQDASTWPSPHKFD 385

  Fly   429 PERFLEDQEQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRFYELLPLGE---ELKPMLN 490
            |:||.:  |.....|:.:.|| |...|...:||.:...||:|.:|:...||.:..   |:|..|.
  Rat   386 PDRFAD--EPVMKVFSSLGFS-GTWECPELRFAYVVTTVLVSVLLKKLHLLAVDRQVFEMKYELV 447

  Fly   491 FILRSASGINVGLR 504
            ...|..:.|.|..|
  Rat   448 TSCREETWITVSER 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 p450 34..493 CDD:278495 107/489 (22%)
Cyp20a1NP_955433.1 p450 43..415 CDD:299894 93/444 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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