DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d20 and Cyp4f39

DIOPT Version :10

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_234837.3 Gene:Cyp4f39 / 299566 RGDID:1308796 Length:550 Species:Rattus norvegicus


Alignment Length:482 Identity:148/482 - (30%)
Similarity:241/482 - (50%) Gaps:67/482 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 RFWILGESLIY---TKDLQ------------------------------YFETIL-SSTTLLEKG 102
            |.|:||...:|   .|.||                              |.:.:| :|..:..|.
  Rat    65 RHWLLGHMSMYLPNEKGLQNEKKVLDTMHHIILAWVGPFLPLLVLVHPDYIKPVLGASAAIAPKD 129

  Fly   103 Q-LYEYLRPFLNDGLLVSTGRKWHARRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLRK-VADGK 165
            : .|.:|:|:|.||||:|.|.||...|::.|.||||.:|:.|::|.::..::|....|: :|:|.
  Rat   130 EFFYSFLKPWLGDGLLISKGNKWSRHRRLLTPAFHFDILKPYMKIFNQSVNIMHAKWRRHLAEGS 194

  Fly   166 -TAVDMLKYVSLAALDVITEAAMGVQVNAQNDPDFPYIKALKSVVYIQPDRMFRFSRRYNWLFPL 229
             |:.||.::|||..||.:.:.......:.|.... .||.::..:..:...|.:|.....::::.|
  Rat   195 VTSFDMFEHVSLMTLDSLQKCVFSYSSDCQEKLS-DYISSIIELSALVVRRQYRLHHYLDFIYYL 258

  Fly   230 AAPLLHRQLLSDIRVMHDFTDKVISERRETVRRAKADGTYRPLSLGDAEIGSKS-----QMALLD 289
            .|.  .|:.......:|:||.:||.:||..:|                |:|:::     |...||
  Rat   259 TAD--GRRFRQACDTVHNFTTEVIQQRRRALR----------------ELGAEAWLKAKQGKTLD 305

  Fly   290 ----ILLQSSINNQPLSDADIREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVL 350
                :||......:.|||.|||.|.|||||||.||||||:|.||:.:|::||.|.:..||:|.|:
  Rat   306 FIDVLLLAKDEEGKELSDEDIRAEADTFMFEGHDTTSSGLSWALFNLAKYPEYQDKCREEIQEVM 370

  Fly   351 GPDASAPVTQAQLQDLKYLDCVIKETMRLYPPVPAIGRHAQKELEIGD-KTIPANTSIYLVLYYA 414
            .......:....|..|.:....|||::|.:|||..|.|...:::::.| :.||......:.:|..
  Rat   371 KGRELEELDWDDLTQLPFTTMCIKESLRQFPPVTLISRRCTEDIKLPDGRIIPKGIICLVSIYGT 435

  Fly   415 HRDANYFPDPLSFRPERFLEDQEQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLIS-KVLRFYEL 478
            |.:...:||...:.|.||..|..|..:..|:|||||||:|||||.||:.||:|::: .:|||...
  Rat   436 HYNPLVWPDSKVYNPYRFDPDIPQQRSPLAFVPFSAGPRNCIGQSFAMAEMRVVVALTLLRFRLS 500

  Fly   479 LPLGEELKPMLNFILRSASGINVGLRP 505
            :....:::.....|||:.:|:.:.:.|
  Rat   501 VDRTRKVRRKPELILRTENGLWLNVEP 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 CYP4 68..501 CDD:410721 147/476 (31%)
Cyp4f39XP_234837.3 CYP4F 82..523 CDD:410772 141/459 (31%)

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