DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d20 and Cyp12d1-d

DIOPT Version :10

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_995812.1 Gene:Cyp12d1-d / 2768720 FlyBaseID:FBgn0053503 Length:521 Species:Drosophila melanogaster


Alignment Length:521 Identity:110/521 - (21%)
Similarity:211/521 - (40%) Gaps:122/521 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VLAFEKS------------AIPGPISIPILGCGLQALHLGAE----NIIGWVGEKFDKYGKTF-- 71
            |||.|::            .||.|.....    ::|...|.|    :|..:......:||..:  
  Fly    25 VLAHEQAKSSITEEHKTYDEIPRPNKFKF----MRAFMPGGEFQNASITEYTSAMRKRYGDIYVM 85

  Fly    72 ------RFWILGESLIYTKDLQ-------------------YFETILSSTTLLEKGQLYEYLRPF 111
                  :.|:   :...|||::                   ||.               |::||.
  Fly    86 PGMFGRKDWV---TTFNTKDIEMVFRNEGIWPRRDGLDSIVYFR---------------EHVRPD 132

  Fly   112 LN---DGLLVSTGRKWHARRKIFTHAF-HFKVLEHYVEIMDRHSSVMVDNLRKVADGKT------ 166
            :.   .||:.|....|...|......| ..:.|..|.|.:...::..::.::::.|.||      
  Fly   133 VYGEVQGLVASQNEAWGKLRSAINPIFMQPRGLRMYYEPLSNINNEFIERIKEIRDPKTLEVPED 197

  Fly   167 ---AVDMLKYVSLAALDVITEAAMG-VQVNAQNDPDFPYIKALKSV------VYIQPDRMFRFSR 221
               .:..|.:.||..  |..:..|| ::.|..|.......:..:.:      :.|||.       
  Fly   198 FTDEISRLVFESLGL--VAFDRQMGLIRKNRDNSDALTLFQTSRDIFRLTFKLDIQPS------- 253

  Fly   222 RYNWLFPLAAPLLHRQLLSDIRVMHDFTDKVISERRETVRRAKADGTYRPLSLGDAEIGSKSQMA 286
                ::.:.:...:|::...:....:.:.|::.|.::.:.:.:..|         .:|.|.|   
  Fly   254 ----MWKIISTPTYRKMKRTLNDSLNVSQKMLKENQDALEKRRQAG---------EKINSNS--- 302

  Fly   287 LLDILLQSSINNQPLSDADIREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLG 351
            :|:.|::.......:...||       :|.|.|.|::.:|..|..:::||:.|.::.|||..:: 
  Fly   303 MLERLMEIDPKVAVIMSLDI-------LFAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIM- 359

  Fly   352 PDASAPVTQAQLQDLKYLDCVIKETMRLYPPVPAIGRHAQKELEIGDKTIPANTSIYLVLYYAHR 416
            |...:.:.:..::|:.||..|||||:|.||......|..|.::.:....:|..|::.|......:
  Fly   360 PTKDSLLNEENMKDMPYLRAVIKETLRYYPNGFGTMRTCQNDVILSGYRVPKGTTVLLGSNVLMK 424

  Fly   417 DANYFPDPLSFRPERFLEDQEQGH----NTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRFYE 477
            :|.|:|.|..|.|||:|.|.|.|.    :.|.::||..||:.|||::...|||:..::|::|.:.
  Fly   425 EATYYPRPDEFLPERWLRDPETGKKMQVSPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFH 489

  Fly   478 L 478
            :
  Fly   490 V 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 CYP4 68..501 CDD:410721 98/462 (21%)
Cyp12d1-dNP_995812.1 CYP24A1-like 76..515 CDD:410677 99/466 (21%)

Return to query results.
Submit another query.