DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d20 and Cyp4a8

DIOPT Version :9

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_038965258.1 Gene:Cyp4a8 / 266674 RGDID:628846 Length:510 Species:Rattus norvegicus


Alignment Length:517 Identity:159/517 - (30%)
Similarity:262/517 - (50%) Gaps:48/517 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TLITGALILLLTWDFGRKRQRVLAFEKSAIPGPISIPILGCGLQALHLGAENIIGWVGEKF-DKY 67
            |::|..|:|..|..|...|:.:|...:. .|.|.|....|..|..|          |.::| |..
  Rat    23 TVLTVLLLLFKTAQFYLHRRWLLRATQQ-FPSPPSHWFFGHKLSFL----------VDQEFQDIL 76

  Fly    68 GKTFRF------WILGESL-IYTKDLQYFETILSSTTLLEKGQLYEYLRPFLNDGLLVSTGRKWH 125
            .:...|      |:.|.:: |...|..|.:.||..:. .:....|.:|.|::..|||:..|:.|.
  Rat    77 TRVKNFPSACPQWLWGSNVRIQVYDPDYMKLILGRSD-PKSHHSYRFLAPWIGYGLLLLNGQTWF 140

  Fly   126 ARRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLRKVADGKTAVDMLKYVSLAALDVITEAAMGVQ 190
            ..|::.|.|||:..|:.||.||.....:|:|...::....:.:::.::::|..||.|.:.|...:
  Rat   141 QHRRMLTPAFHYDTLKPYVGIMADSVRIMLDKWEQIVGQDSTLEIFQHITLMTLDTIMKCAFSQE 205

  Fly   191 VNAQNDPDF-PYIKALKSVVYIQPDRMFRFSRRYNWLFPLAAPLLHRQLLSDIRVMHDFTDKVIS 254
            .:.|.|..: .||||::.:..:...|:.....:.:.::.|::.  .|:..|..::.|:.||:||.
  Rat   206 GSVQLDRKYKSYIKAVEDLNNLSFFRIRNIFHQNDIIYSLSSN--GRKARSAWQLAHEHTDQVIK 268

  Fly   255 ERRETVRRAKADGTYRPLSLGDAE----IGSKSQMALLDILLQSSI-NNQPLSDADIREEVDTFM 314
            .|:              ..|.|.|    :..|.::..|||||.:.| |...|||.|:|.||||||
  Rat   269 SRK--------------AQLQDEEELQKVKQKRRLDFLDILLFARIENGSSLSDKDLRAEVDTFM 319

  Fly   315 FEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLGPDASAPVTQAQLQDLKYLDCVIKETMRL 379
            |||.|||:||:|...||:|.:||.||...:|:|.:||..||  :|...|..:.|....|||.:|:
  Rat   320 FEGHDTTASGISWIFYALATNPEHQQGCRKEIQSLLGDGAS--ITWDDLDKMPYTTMCIKEALRI 382

  Fly   380 YPPVPAIGRHAQKELEIGD-KTIPANTSIYLVLYYAHRDANYFPDPLSFRPERFLEDQEQGHNTF 443
            ||||.|:.|.....:...| :::|...::.|..|..|.:...:|:|..|.|.||.  .|...::.
  Rat   383 YPPVTAVSRMLSTPVTFPDGRSLPKGITVMLSFYGLHHNPTVWPNPEVFDPYRFA--PESSRHSH 445

  Fly   444 AYVPFSAGPKNCIGQKFAVLEMKVLISKVLRFYELLPLGEELK-PMLNFILRSASGINVGLR 504
            :::|||.|.:||||::||:.|:||.::..|..:||||....:. |:...:|:|.:||.:.|:
  Rat   446 SFLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPIPIPRLVLKSKNGIYLRLK 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 p450 34..493 CDD:278495 146/474 (31%)
Cyp4a8XP_038965258.1 CYP4B-like 72..505 CDD:410771 143/453 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348495
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

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