DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d20 and Cyp3a23-3a1

DIOPT Version :10

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_037237.2 Gene:Cyp3a23-3a1 / 25642 RGDID:628626 Length:502 Species:Rattus norvegicus


Alignment Length:529 Identity:148/529 - (27%)
Similarity:261/529 - (49%) Gaps:73/529 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WLTLITGALILLLTWDFGRKRQRVLAFEKSAIPGPISIPILGCGLQALHLGAENIIGWVGEKFD- 65
            |:.|   |::|:|.:.||.:...:  |:|..||||..:|..|..|. .::|.     |   ||| 
  Rat    12 WVLL---AVVLVLLYGFGTRTHGL--FKKQGIPGPKPLPFFGTVLN-YYMGL-----W---KFDV 62

  Fly    66 ----KYGKTFRFWILGES---LIYTKDLQYFETILSSTTLLEKGQLYEYLRPF-----LNDGLLV 118
                ||||   .|.|.:.   |....|.:..:.:|    :.|...::...|.|     :...:.|
  Rat    63 ECHKKYGK---IWGLFDGQMPLFAITDTEMIKNVL----VKECFSVFTNRRDFGPVGIMGKAISV 120

  Fly   119 STGRKWHARRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLRKVADGKTAVDMLKYVSLAALDVIT 183
            |...:|...|.:.:..|....|:....:::::..::|..||: ..|| .|.:.:.....::||||
  Rat   121 SKDEEWKRYRALLSPTFTSGRLKEMFPVIEQYGDILVKYLRQ-EKGK-PVPVKEVFGAYSMDVIT 183

  Fly   184 EAAMGVQVNAQNDPDFPYIKALKSVVYIQ-PDRMFRFSRRYNWLFPLAAPLLHRQLLS------- 240
            ..:.||.|::.|:|..|:::..|.::.|. .|.:|...    .|||...|:.  ::|:       
  Rat   184 STSFGVNVDSLNNPKDPFVEKAKKLLRIDFFDPLFLSV----VLFPFLTPVY--EMLNICMFPKD 242

  Fly   241 DIRVMHDFTDKVISERRETVRRAKADGTYRPLSLGDAEIGSKSQMALLDILLQSSINNQPLSDAD 305
            .|.....|..::...|.::|::.:.|  :..|.: :|...||.:.           ::..|||.:
  Rat   243 SIEFFKKFVYRMKETRLDSVQKHRVD--FLQLMM-NAHNDSKDKE-----------SHTALSDME 293

  Fly   306 IREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLGPDASAPVTQAQLQDLKYLD 370
            |..:...|:|.|.:.|||.:|..|:::|.||:.|:::.||:.|.| |: .||.|...:.:::|||
  Rat   294 ITAQSIIFIFAGYEPTSSTLSFVLHSLATHPDTQKKLQEEIDRAL-PN-KAPPTYDTVMEMEYLD 356

  Fly   371 CVIKETMRLYPPVPAIGRHAQKELEIGDKTIPANTSIYLVLYYAHRDANYFPDPLSFRPERFLED 435
            .|:.||:||||....:.|..:|::||....:|..:.:.:..|..|||..::|:|..||||||.::
  Rat   357 MVLNETLRLYPIGNRLERVCKKDVEINGVFMPKGSVVMIPSYALHRDPQHWPEPEEFRPERFSKE 421

  Fly   436 QEQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRFYELLPLGEELKPMLNFILRSASGIN 500
            .:...:.:.|:||..||:||||.:||::.||:.::|||:.:...|..|...|    :..|..|: 
  Rat   422 NKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSFQPCKETQIP----LKLSRQGL- 481

  Fly   501 VGLRPRKAL 509
              |:|.|.:
  Rat   482 --LQPTKPI 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 CYP4 68..501 CDD:410721 122/448 (27%)
Cyp3a23-3a1NP_037237.2 CYP3A 67..491 CDD:410743 127/460 (28%)

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