DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d20 and cyp-13A3

DIOPT Version :9

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_496110.1 Gene:cyp-13A3 / 188359 WormBaseID:WBGene00011675 Length:520 Species:Caenorhabditis elegans


Alignment Length:558 Identity:135/558 - (24%)
Similarity:240/558 - (43%) Gaps:102/558 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LITGALIL------LLTWDFGRKRQRVLAFEKSAIPGPISIPILGCGLQALHLGAENIIGWVGEK 63
            ||..||.:      |..|.|         :.:..|.||..:|..|. :.|.....:..|..:|:.
 Worm     6 LIAIALFIGVFTYYLWIWSF---------WMRKGIKGPRGLPFFGI-INAFQSYEKPWILRLGDW 60

  Fly    64 FDKYGKTFRFWILGESLIYTKDLQYFETILSSTTLLEKGQLY-EYLRPFLND-------GLLVST 120
            ..:||..:.|....|..:...|.::...:.    :.:....| ....|...|       .|:.|.
 Worm    61 TKEYGPMYGFTDGVEKTLVVSDPEFVHEVF----VKQFDNFYARKQNPLQGDPDKDPRIHLVTSQ 121

  Fly   121 GRKWHARRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLRK-VADGKTAVDMLKYVSLAALDVITE 184
            |.:|...|.:.:..|..|.|......::...:.|:.:|.| .|.||| :|:|:|.....:|:|.:
 Worm   122 GHRWKRLRTLASPTFSNKSLRKIFSTVEESVAEMMRHLEKGTAGGKT-IDILEYYQEFTMDIIGK 185

  Fly   185 AAMGVQVNAQNDPDFPYIKALKSVVYIQPDRMFRFSRRYNWLFPLAAPL-----LHRQLLSDI-- 242
            .|||...:...:.  |::..::::          |:.|.|.:|.:...:     :.|...|.:  
 Worm   186 IAMGQSGSMMFEN--PWLDKIRAI----------FNTRGNIIFIICGIVPFTGSIFRWFFSKVPT 238

  Fly   243 -----RVMHD----FTDKVISERRETVRRAKADGTYRPLSLGDAEIG----------------SK 282
                 .:||.    .|.:|  |:|....:|..:.:..|....|..:.                ::
 Worm   239 AQTVTSLMHTLEIALTKRV--EQRAADEKAGIESSGEPQDFIDLFLDVQADTDFLEDETKNGFAR 301

  Fly   283 SQMALLDILLQSSINNQPLSDADIREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQ 347
            ||:..:|         :.|:..:|..::..|:..|.|||:..:|::.|.:|||||:|:::.||:.
 Worm   302 SQIVKVD---------KHLTFDEIIGQLFVFLLAGYDTTALSLSYSSYLLARHPEIQKKLQEEVD 357

  Fly   348 RVLGPDASAPVTQAQLQDLKYLDCVIKETMRLYPPVPAI-GRHAQKELEIGDKTIPANTSIYLVL 411
            |.. ||..  ||..||..|||::||||||:||||....: .|...|...:....|...|::....
 Worm   358 REC-PDPE--VTFDQLSKLKYMECVIKETLRLYPLASIVHNRKCMKSTTVLGMKIEEGTNVQADT 419

  Fly   412 YYAHRDANYFPDPLS-FRPERFLEDQEQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRF 475
            :..|.|..::.:..: |:|||:....||.....||:||..||:.|||.:.|.:|.|:|::::|:.
 Worm   420 WTLHYDPKFWGENANEFKPERWESGDEQAVAKGAYLPFGLGPRICIGMRLAYMEEKMLLAQILKK 484

  Fly   476 YEL-------LPLGEELKPMLNFILRSASGINVGLRPR 506
            |.|       :||     .::.....:.:.:::.|:||
 Worm   485 YSLETTFETHIPL-----KLVGIATTAPTNVHLKLKPR 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 p450 34..493 CDD:278495 124/508 (24%)
cyp-13A3NP_496110.1 p450 33..512 CDD:278495 124/515 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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