DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d20 and cyp-13A4

DIOPT Version :9

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_496111.1 Gene:cyp-13A4 / 188355 WormBaseID:WBGene00011671 Length:520 Species:Caenorhabditis elegans


Alignment Length:516 Identity:127/516 - (24%)
Similarity:228/516 - (44%) Gaps:80/516 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LITGALIL-LLT-----WDFGRKRQRVLAFEKSAIPGPISIPILGCGLQALHLGAENIIGWVGEK 63
            ||.|||.: .||     |.|         :.:..:.||...|..|..|:........::. :||.
 Worm     6 LIAGALFIGFLTYYIWIWSF---------WIRKGVKGPRGFPFFGVILKFHDYENPGLLK-LGEW 60

  Fly    64 FDKYGKTF--------RFWILGESLIYTKDLQYFETILSSTTLLEKGQLYEYLRPFLNDGLLVST 120
            ..|||..:        ...:.....::...::.|:......|...:|...:..|..    |:::.
 Worm    61 TKKYGSIYGITEGVEKTLVVSNPEFVHEVFVKQFDNFYGRKTNPIQGDPNKNKRAH----LVLAQ 121

  Fly   121 GRKWHARRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLRKV----ADGKTAVDMLKYVSLAALDV 181
            |.:|...|.:.:..|..|.|.   :||......:|:.:|.:    |.|| |||:|.|.....||:
 Worm   122 GHRWKRLRTLASPTFSNKSLR---KIMSTVEETVVELMRHLDEASAKGK-AVDLLDYYQEFTLDI 182

  Fly   182 ITEAAMGVQVNAQ-NDPDFPYIKALKSVVYIQPDRMFRFSRRYNWL----FPLAAPLLHRQLLSD 241
            |...|||...:.. .:|..|.:|           .:|:...:..:|    ||:|..|: |||...
 Worm   183 IGRIAMGQTESLMFRNPMLPKVK-----------EIFKKGGKMPFLIAGVFPIAGTLM-RQLFMK 235

  Fly   242 ----------IRVMHDFTDKVISERRETVRRAKADGTYRPLSLGDAEIGSKSQMALLDILLQSSI 296
                      :..|....:|.: |:|...::|..:.:..|....|..:.:::.:..::  .:|::
 Worm   236 FPKFSPAFGIMNTMEKALNKRL-EQRAADKKAGIEPSGEPQDFIDLFLDARANVDFIE--EESTL 297

  Fly   297 N---------NQPLSDADIREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLGP 352
            .         ::.|:..:|..::..|:..|.|||:..:|::.|.:|.|||:|:::.||:.|.. |
 Worm   298 GFAKSEVLKVDKHLTFDEIIGQLFVFLLAGYDTTALSLSYSSYLLATHPEIQKKLQEEVDREC-P 361

  Fly   353 DASAPVTQAQLQDLKYLDCVIKETMRLYPPVPAI-GRHAQKELEIGDKTIPANTSIYLVLYYAHR 416
            |..  ||..|:..|||::||:||.:|:||....: .|...|:..:....|...|::.:..:..|.
 Worm   362 DPE--VTFDQISKLKYMECVVKEALRMYPLASLVHNRKCMKKTNVLGVEIDEGTNVQVDTWTLHY 424

  Fly   417 DANYFPDPLS-FRPERFLEDQEQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRFY 476
            |...:.|..| |:|||:....|..:....|:||..||:.|||.:.|::|.|:|::.:|:.|
 Worm   425 DPKVWGDDASEFKPERWETGDELFYAKGGYLPFGMGPRICIGMRLAMMEEKLLLTHILKKY 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 p450 34..493 CDD:278495 118/481 (25%)
cyp-13A4NP_496111.1 p450 33..514 CDD:278495 118/480 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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