DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d20 and cyp-13A12

DIOPT Version :9

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_499705.1 Gene:cyp-13A12 / 184473 WormBaseID:WBGene00008810 Length:518 Species:Caenorhabditis elegans


Alignment Length:522 Identity:146/522 - (27%)
Similarity:233/522 - (44%) Gaps:91/522 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LTLITGAL-ILLLTWDFGRKRQRVLAFEKSAIPGPISIPILGCGLQALHLGAEN-----IIGWVG 61
            ||.|.|.| ..|.||.:.::|         .|.||...||||..|:.  |.:||     :..|. 
 Worm     9 LTSIIGVLSFYLWTWSYWKRR---------GIAGPSGYPILGSALEM--LSSENPPYLQLKEWT- 61

  Fly    62 EKFDKYGKTFRFWILGESLIYTKDLQYFETILSSTTLLEKGQLYEY-------LRPFLND----- 114
               .:|||.:.   :.|.|..|       .::|...|:::..:.:|       |.|...|     
 Worm    62 ---KQYGKVYG---ITEGLSRT-------LVISDPDLVQEVFVKQYDNFFGRKLNPIQGDPNKDK 113

  Fly   115 --GLLVSTGRKWHARRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLRKVADGKTAVDMLKYVSLA 177
              .|..|.|.:|...|.|.:..|....|......::..:..::.::.:..||...:|:|.:....
 Worm   114 RVNLFSSQGHRWKRLRTISSPTFSNNSLRKLKTTVEECAVELLRHIEQHTDGGQPIDLLDFYQEF 178

  Fly   178 ALDVITEAAMGVQVNAQ--NDPDFPYIKALKSVVYIQPDRMFRFSRRYNWLFPLAAPLLHRQLLS 240
            .||||...||| |.::|  .:|..||::|    |:.:|.:....|   ..|.|...|:|...:.|
 Worm   179 TLDVIGRIAMG-QTDSQMFKNPLLPYVRA----VFGEPRKGLFLS---GSLAPWIGPILRMVMFS 235

  Fly   241 --------DIRVMHDFTDKVISERRETVRRAKADGTY---RPLSLGDAEIGSKSQMALLDILLQS 294
                    .:.|:...::.|  |:|..:|.|......   .|....|..:.:||.    |:.|: 
 Worm   236 LPNIVKNPAVHVIRHTSNAV--EQRVKLRMADEKAGIDPGEPQDFIDLFLDAKSD----DVELE- 293

  Fly   295 SINNQPLSDADIR-------EEV----DTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQR 348
              ||:..:.|.::       ||:    ..|:..|.|||:..:|::.:.:|.||:||:::.||:.|
 Worm   294 --NNEDFTKAGVKVTRQLTTEEIVGQCFVFLIAGFDTTALSLSYSSFLLATHPKVQKKLQEEIDR 356

  Fly   349 VLGPDASAPVTQAQLQDLKYLDCVIKETMRLYP-PVPAIGRHAQKELEIGDKTIPANTSIYLVLY 412
            ..   |...||..||..|||::||||||:|:|| ...|..|...:..:||:..|...|:|....:
 Worm   357 EC---ADPEVTFDQLSKLKYMECVIKETLRMYPLGALANSRCCMRATKIGNYEIDEGTNILCDTW 418

  Fly   413 YAHRDANYF-PDPLSFRPERFLEDQEQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRFY 476
            ..|.|.:.: .|...|:|||:....|..:....|:||..||:.|||.:.|.:|.|:|:|.:||.|
 Worm   419 TLHSDKSIWGEDAEEFKPERWESGDEHFYQKGGYIPFGLGPRQCIGMRLAYMEEKLLLSHILRKY 483

  Fly   477 EL 478
            .|
 Worm   484 TL 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 p450 34..493 CDD:278495 136/490 (28%)
cyp-13A12NP_499705.1 p450 33..507 CDD:278495 136/489 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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