DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d20 and cyp-13A11

DIOPT Version :9

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_499704.1 Gene:cyp-13A11 / 184472 WormBaseID:WBGene00008809 Length:517 Species:Caenorhabditis elegans


Alignment Length:511 Identity:132/511 - (25%)
Similarity:216/511 - (42%) Gaps:94/511 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 TWDFGRKRQRVLAFEKSAIPGPISIPILGCGLQAL-HLGAEN-----IIGWVGEKFDKYGKTFRF 73
            ||.:.|         :..||||...|.||..|..: |   ||     :..|..:    |||.:. 
 Worm    21 TWTYWR---------RCGIPGPQGYPFLGSALDMMDH---ENPPFLQLKKWTSQ----YGKVYG- 68

  Fly    74 WILGESLIYTKDLQYFETILSSTTLLEKGQLYEY-------LRPFLND-------GLLVSTGRKW 124
              :.|.|:.|       .::|.|.|:.:..:.:|       |.|...|       .|..:.|.:|
 Worm    69 --ITEGLLRT-------LVISDTNLIHEVFVKQYDNFYGRNLNPIQGDPNREKRVTLFSAQGHRW 124

  Fly   125 HARRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLRKVADGKTAVDMLKYVSLAALDVITEAAMGV 189
            ...|.|....|....|......::..:..::.::.:...|..|:|:|:|.....:|||...||| 
 Worm   125 KRLRTIANPTFSSNNLRKIQVTVEDSALELLRHIEQHTAGGKAIDVLEYFQEFTMDVIGRIAMG- 188

  Fly   190 QVNAQNDPDF-----PYIKALKSVVYIQPDRMFRFSRRYNWLFPLAAPLLHRQLL--------SD 241
                  .||.     |.:...:. |:.:|......|   ..|||...|::.:.:.        ..
 Worm   189 ------QPDSLMFKNPLLPCARD-VFGKPRTALFLS---GILFPWIGPMIRKVVFYFTNVFNNPA 243

  Fly   242 IRVMHDFTDKVISERRETVRRAKAD-GTYRPLSLGDAEIGSKSQMALLDILLQSSINNQPLSDAD 305
            .::|:...:.|....::.:...||. ....|....|..:.:||.    |:.|:   ||:..:.|.
 Worm   244 AQIMYQTANAVEQRIKQRMAEEKAGIDPGEPQDFIDLFLDAKSD----DMELE---NNEDFTKAG 301

  Fly   306 I-------REEV----DTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLGPDASAPVT 359
            :       ::||    ..|:..|.|||:..:|::.:.:|.||:.|:::.||:.|..   |...||
 Worm   302 VKVTRQLTKDEVVGQCFVFLIAGFDTTALSLSYSSFLLATHPKAQKKLQEEIDREC---ADPEVT 363

  Fly   360 QAQLQDLKYLDCVIKETMRLYP-PVPAIGRHAQKELEIGDKTIPANTSIYLVLYYAHRDANYF-P 422
            ..||..|||::||||||:|:|| ...|..|...:..:||:..|.....|....:..|.|.:.: .
 Worm   364 FDQLSKLKYMECVIKETLRMYPLGALANSRRCMRSTKIGNYEIEKGVDILCDTWTLHYDKSIWGE 428

  Fly   423 DPLSFRPERFLEDQEQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRFYEL 478
            |...|:|||:....|..:....|:||..||:.|||.:.|.:|.|:|:|.:||.|.|
 Worm   429 DAEEFKPERWESGDEHFYQKGGYIPFGLGPRQCIGMRLAYMEEKLLLSHILRKYTL 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 p450 34..493 CDD:278495 128/492 (26%)
cyp-13A11NP_499704.1 p450 31..506 CDD:278495 128/492 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5309
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.860

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