DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d20 and cyp-29A4

DIOPT Version :9

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_505490.2 Gene:cyp-29A4 / 181926 WormBaseID:WBGene00007140 Length:502 Species:Caenorhabditis elegans


Alignment Length:540 Identity:171/540 - (31%)
Similarity:272/540 - (50%) Gaps:80/540 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LITGALILLLT---------------WDFGRKRQRVLAFEKSAIPGPISIPILGCG--------- 45
            ||..||.||..               |.:|.|           :|||.:.||.|..         
 Worm     4 LIPVALALLFVYLLSFYDTIRLMRKFWIYGGK-----------MPGPPAHPIFGNASLFKNKTTK 57

  Fly    46 ------LQALHLGAENIIGWVGEKFDKYGKTFRFWILGESLIYTKDLQYFETILSSTTLLEKGQL 104
                  :|..|           |...|.....|..::....::..:.:...|||.|:|.:.||..
 Worm    58 DFVELFVQLAH-----------EARSKGANLMRTQVMNRIYVWPLNGKTAATILESSTEVNKGDD 111

  Fly   105 YEYLRPFLNDGLLVSTGRKWHARRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLRKVADGKTAVD 169
            |.:|.|:|..|||:..|.||.:.|:|.|.||||..||.|:::.:..|.:::|.|.|:|:.:..||
 Worm   112 YAFLVPWLGGGLLMEKGEKWKSHRRILTPAFHFAKLEGYLDVFNSESKILIDCLEKIAETQETVD 176

  Fly   170 MLKYVSLAALDVITEAAMGVQVNAQNDPDFPYIKALK-----SVVY-IQPDRMFRFSRRYNWLFP 228
            :..:.....||:|...|||::::|||..:..|::|::     :|.| :.|   |.::|...|  .
 Worm   177 LFPFFKRCTLDIICGTAMGIKLDAQNVHNLGYVQAVEGFNKLTVEYSLNP---FLWNRFVYW--A 236

  Fly   229 LAAPLLHRQLLSDIRVMHDFTDKVISERRETVRRAKADGTYRPLSLGDAEIGSKSQMALLDILLQ 293
            |....:|...|..::   .||:..|.|||..:...:.:           :..||.:|..|||||.
 Worm   237 LGYQKMHDDFLYTLK---KFTNDAIVERRTVIASGEIE-----------KETSKRKMNFLDILLN 287

  Fly   294 SSINNQPLSDADIREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLGPDASAPV 358
            |..:|:..|| :||:|||||||.|.||||:.:|...:.||.:||||:.:::|:..:.|.|.:..|
 Worm   288 SEESNELTSD-EIRKEVDTFMFAGHDTTSTSLSWLCWNIAHNPEVQENVYKEIISIFGEDPNQDV 351

  Fly   359 TQAQLQDLKYLDCVIKETMRLYPPVPAIGRHAQKELEIGDKTIPANTSIYLVLYYAHRDANYFPD 423
            |...:..|:|.:.|:||:.|::||||...|...|::.|...|||:..:|.:.....|.:...:.:
 Worm   352 TSENINRLEYTERVLKESKRMFPPVPGFQRKLTKDIVIDGITIPSEGNITISPTVLHCNPFVYQN 416

  Fly   424 PLSFRPERFLEDQEQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRFYELLPLGE--ELK 486
            |..|.|:|||.::....:::.|:|||||.:|||||||::|..||::..:||.::|.|..|  |.|
 Worm   417 PEKFDPDRFLPEECAKRHSYDYIPFSAGLRNCIGQKFSILNEKVMLIHILRNFKLEPKLEFYETK 481

  Fly   487 PMLNFILRSASGINVGLRPR 506
            |:...:.:.:.||.|.|..|
 Worm   482 PLFEVVAKPSHGIPVKLIKR 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 p450 34..493 CDD:278495 157/481 (33%)
cyp-29A4NP_505490.2 p450 37..473 CDD:278495 152/466 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163505
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28797
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24291
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.860

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