DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4d20 and cyp-13A10

DIOPT Version :10

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_496085.3 Gene:cyp-13A10 / 174522 WormBaseID:WBGene00014254 Length:519 Species:Caenorhabditis elegans


Alignment Length:528 Identity:131/528 - (24%)
Similarity:222/528 - (42%) Gaps:106/528 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TLITGAL-ILLLTWDFGRKRQRVLAFEKSAIPGPISIPILGC---GLQALHLGAENIIGWVGEKF 64
            ||..|.: ..|..|.:.|:|         .||||:..|::|.   .|::.:.....|..|.....
 Worm    10 TLFIGFISYYLWIWTYWRRR---------GIPGPLGYPLVGSFPKTLKSEYPQYLQIRDWTKLYG 65

  Fly    65 DKYGKTFRFWILGESLIYTKDLQYFETILSSTTLLEKGQLYEY-------LRPFLND-------G 115
            ..||.|       |..|.|       .|:|...::.:..:.:|       |.|...|       .
 Worm    66 PIYGYT-------EGTIKT-------LIVSDIDIVRQIFVEQYDNFYGRKLNPIQGDPEKDERTN 116

  Fly   116 LLVSTGRKWHARRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLRKVADGKTAVDMLKYVSLAALD 180
            |..:.|.:|...|.|.:..|....|......::..:..::.::.:.......:|||::.....:|
 Worm   117 LFSAQGFRWKRLRAISSPTFSNNSLRKINVTVEDSAMELLRHIEEQTSEGQQIDMLQFYQEFTMD 181

  Fly   181 VITEAAMGVQVNAQ--NDPDFPYIKAL-----KSV-----VYIQPDRMFRFSRRYNWLFPL--AA 231
            .|...||| |.::|  .:|...:::|:     |.:     |:....::|||   :...|||  ||
 Worm   182 TIGRIAMG-QTDSQMFKNPLLKFVRAIFGDNRKHIPLIGGVFPTLAQVFRF---FMLKFPLLGAA 242

  Fly   232 PLLH-------------------RQLLSDIRVMHDFTDKVISERRETVRRAKADGTYRPLSLGDA 277
            ..:|                   |:...:|....||.|..:..|.:.|...:.:.       ||.
 Worm   243 NFIHVNKTVVTAVQNRIDQRENDRKNGIEIGEPQDFIDLFLEARADDVEHFQENN-------GDF 300

  Fly   278 EIGSKSQMALLDILLQSSINNQPLSDADIREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRI 342
               ||:          ||..|:.|:..:|..:...|:..|.|||:..:|:..:.:|.|||||:::
 Worm   301 ---SKT----------SSYGNRQLTTQEIVGQCLVFLIAGFDTTALSLSYTTFLLATHPEVQKKL 352

  Fly   343 FEELQR-VLGPDASAPVTQAQLQDLKYLDCVIKETMRLYP-PVPAIGRHAQKELEIGDKTIPANT 405
            .||::| .:.|..|..    .|..|||:||:||||:|||| ...|..|...:..::|:..:...|
 Worm   353 QEEIERECIEPSISFD----HLSKLKYMDCIIKETLRLYPLGTMANSRRCMRATKLGNVEVEVGT 413

  Fly   406 SIYLVLYYAHRDANYF-PDPLSFRPERFLEDQ-EQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVL 468
            .:.:..:..|.|...: .|...|:|||:|:.. :|......|:.|..||:.|:|.:.|.:|.|:|
 Worm   414 MVQVDTWSLHTDTKIWGDDAKEFKPERWLDPNCDQVFQKGGYISFGLGPRQCVGMRLAYMEEKML 478

  Fly   469 ISKVLRFY 476
            ::.:||.|
 Worm   479 LAHILRKY 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 CYP4 68..501 CDD:410721 114/460 (25%)
cyp-13A10NP_496085.3 CYP3A-like 64..509 CDD:410678 115/465 (25%)

Return to query results.
Submit another query.