DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d20 and CYP26A1

DIOPT Version :10

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_000774.2 Gene:CYP26A1 / 1592 HGNCID:2603 Length:497 Species:Homo sapiens


Alignment Length:495 Identity:117/495 - (23%)
Similarity:202/495 - (40%) Gaps:57/495 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LITGALILLL------TWDF----GRKRQRVLAFEKSAIPGPISIPILGCGLQALHLGAENIIGW 59
            |.|..|.|||      .||.    ||.|...|...    ||.:..|..|..||.:....:    :
Human    11 LCTFVLPLLLFLAAIKLWDLYCVSGRDRSCALPLP----PGTMGFPFFGETLQMVLQRRK----F 67

  Fly    60 VGEKFDKYGKTFRFWILGESLIYTKDLQYFETILSSTTLLEKGQLYEYLRPFLNDGLLVSTGRKW 124
            :..|..|||..::..:.|...:..........||.....|........:|..|..|.|.:.....
Human    68 LQMKRRKYGFIYKTHLFGRPTVRVMGADNVRRILLGEHRLVSVHWPASVRTILGSGCLSNLHDSS 132

  Fly   125 H-ARRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLRKVADGKTAVDMLKYVSLAALDVITEAAMG 188
            | .|:|:...||..:.||.||.::.......::  :.::.|:..:.:...|......:.....:|
Human   133 HKQRKKVIMRAFSREALECYVPVITEEVGSSLE--QWLSCGERGLLVYPEVKRLMFRIAMRILLG 195

  Fly   189 V--QVNAQNDPDFPYIKALKSVVYIQPDRMFRFSRRYNWLFPLAAPL--LHRQLLSDIRVMHDFT 249
            .  |:....|.:...::|.:.:.            |..:..|:..|.  |:|.:.:         
Human   196 CEPQLAGDGDSEQQLVEAFEEMT------------RNLFSLPIDVPFSGLYRGMKA--------- 239

  Fly   250 DKVISERRETVRRAKADGTYRPLSLGDAEIGSKSQMALLDILLQSSINNQPLSDADIREEVDTFM 314
            ..:|..|.|...|||..|    |...:|..|.|..:.||  :..|....:.|....:::.....:
Human   240 RNLIHARIEQNIRAKICG----LRASEAGQGCKDALQLL--IEHSWERGERLDMQALKQSSTELL 298

  Fly   315 FEGDDTTSSGVSHALYAIARHPEVQQRIFEELQR---VLGPDASAPVTQAQLQDLKYLDCVIKET 376
            |.|.:||:|..:..:..:..:|.|.|::.|||:.   :...:....:....|:.|||:.||||||
Human   299 FGGHETTASAATSLITYLGLYPHVLQKVREELKSKGLLCKSNQDNKLDMEILEQLKYIGCVIKET 363

  Fly   377 MRLYPPVPAIGRHAQKELEIGDKTIPANTSIYLVLYYAHRDANYFPDPLSFRPERFLEDQEQGHN 441
            :||.||||...|.|.|..|:....||...::...:...|..|..|.:...|.|:||:....:..:
Human   364 LRLNPPVPGGFRVALKTFELNGYQIPKGWNVIYSICDTHDVAEIFTNKEEFNPDRFMLPHPEDAS 428

  Fly   442 TFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRF--YELL 479
            .|:::||..|.::|:|::||.:.:|:...::.|.  ::||
Human   429 RFSFIPFGGGLRSCVGKEFAKILLKIFTVELARHCDWQLL 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 CYP4 68..501 CDD:410721 96/422 (23%)
CYP26A1NP_000774.2 CYP26A1 55..490 CDD:410731 102/447 (23%)

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