DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d20 and Cyp4v3

DIOPT Version :9

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_598730.1 Gene:Cyp4v3 / 102294 MGIID:2142763 Length:525 Species:Mus musculus


Alignment Length:547 Identity:202/547 - (36%)
Similarity:307/547 - (56%) Gaps:71/547 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWLTL---------------ITGALILL----LTWDFGRKRQRVLAFEKSAIPGPI-SIPILGCG 45
            :||.|               :.||.||:    :...:.||.|::     .:||... :.|::|  
Mouse     4 LWLGLSGQKLLLWGAASAVSLAGATILISIFPMLVSYARKWQQM-----RSIPSVARAYPLVG-- 61

  Fly    46 LQALHLGAENIIGWVGEKFDK---YGKTFR------FWILGESLIYTKDLQYFETILSSTTLLEK 101
             .||::...|     .|.|.:   |.:.||      .||....|:.....:..|.||:|:..::|
Mouse    62 -HALYMKPNN-----AEFFQQLIYYTEEFRHLPIIKLWIGPVPLVALYKAENVEVILTSSKQIDK 120

  Fly   102 GQLYEYLRPFLNDGLLVSTGRKWHARRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLRKVADGKT 166
            ..||::|:|:|..|||.|||.||..|||:.|..|||.:||:::::|:..::::|:.|.|..: :.
Mouse   121 SFLYKFLQPWLGLGLLTSTGSKWRTRRKMLTPTFHFTILENFLDVMNEQANILVNKLEKHVN-QE 184

  Fly   167 AVDMLKYVSLAALDVITEAAMGVQVNAQNDPDFPYIKALKSVVYIQPDRMFRFSRRYNWL-FPLA 230
            |.:...|::|.|||:|.|.|||..:.||::.|..|::    .||...|.::| ..:..|| |.|.
Mouse   185 AFNCFFYITLCALDIICETAMGKNIGAQSNNDSEYVR----TVYRMSDMIYR-RMKMPWLWFDLW 244

  Fly   231 APLL-----HRQLLSDIRVMHDFTDKVISERRETVRRAKADGTYRPLSLGDAEIGSKS-QMALLD 289
            ..:.     |::   .::.:|.||:.||:||.:. |:|:.|.|    ..|...|.||: :.|.||
Mouse   245 YLVFKEGRDHKR---GLKCLHTFTNNVIAERVKE-RKAEEDWT----GAGRGPIPSKNKRKAFLD 301

  Fly   290 ILLQSSINNQP---LSDADIREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLG 351
            :||  |:.::.   ||..|||||||||||||.|||::.::.:||.:..:||||:::.:||..|.|
Mouse   302 LLL--SVTDEEGNRLSQEDIREEVDTFMFEGHDTTAAAINWSLYLLGTNPEVQRKVDQELDEVFG 364

  Fly   352 PDASAPVTQAQLQDLKYLDCVIKETMRLYPPVPAIGRHAQKELEIGDKTIPANTSIYLVLYYAHR 416
             .:..|||...|:.|||||||||||:|::|.||...|...::.|:|...:...|...::.|..||
Mouse   365 -RSHRPVTLEDLKKLKYLDCVIKETLRVFPSVPLFARSLSEDCEVGGYKVTKGTEAIIIPYALHR 428

  Fly   417 DANYFPDPLSFRPERFLEDQEQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLR--FYELL 479
            |..|||||..||||||..:..||.:.:|||||||||:|||||||||:|.|.:::.:||  :.|..
Mouse   429 DPRYFPDPEEFRPERFFPENSQGRHPYAYVPFSAGPRNCIGQKFAVMEEKTILACILRQFWVESN 493

  Fly   480 PLGEELKPMLNFILRSASGINVGLRPR 506
            ...|||....:.|||..:||.:.|:.|
Mouse   494 QKREELGLAGDLILRPNNGIWIKLKRR 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 p450 34..493 CDD:278495 184/480 (38%)
Cyp4v3NP_598730.1 p450 51..517 CDD:278495 189/490 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844937
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24291
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.850

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