DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4d20 and cyp4v2.1

DIOPT Version :9

Sequence 1:NP_647723.2 Gene:Cyp4d20 / 38311 FlyBaseID:FBgn0035344 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_002934446.1 Gene:cyp4v2.1 / 100485929 XenbaseID:XB-GENE-22069503 Length:523 Species:Xenopus tropicalis


Alignment Length:542 Identity:187/542 - (34%)
Similarity:300/542 - (55%) Gaps:69/542 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWLTLITGALILLLT----------WDFGRKRQRVLAFEKSAIPGP-ISIPILGCGLQALHLGAE 54
            :|:    .|.::|||          .|:.||.:.:     ..|||| .:.||:|..|.....|.:
 Frog    11 VWV----AAAVVLLTLLALSILPALQDYVRKWKLM-----KPIPGPGPNYPIVGDALFLKPNGGD 66

  Fly    55 NIIGWVGEKFDKYGKTFR------FWI--LGESLIYTKDLQYFETILSSTTLLEKGQLYEYLRPF 111
            ..:     :..::.::||      .||  :...::|..|.  .|.|||::..::|...|::|.|:
 Frog    67 FFL-----QMCEFTESFRSEPLIKIWIGPIPFIIVYHADT--VEPILSTSKHMDKAYSYKFLHPW 124

  Fly   112 LNDGLLVSTGRKWHARRKIFTHAFHFKVLEHYVEIMDRHSSVMVDNLRKVADGKTAVDMLKYVSL 176
            |..|||.|||.||.:|||:.|..|||.:|..::|:|:..|.::|:.|:|..||: :.:....|:|
 Frog   125 LGKGLLTSTGEKWRSRRKMITPTFHFAILSEFLEVMNEQSKILVEKLQKHVDGE-SFNCFMDVTL 188

  Fly   177 AALDVITEAAMGVQVNAQNDPDFPYIKALKSVVYIQPDRMFRFSRRYNWL---FPLAAPLLHRQL 238
            .|||:|:|.|||.::.||::.|..|:.|    :|...|.:.| .::..||   |..|.....::.
 Frog   189 CALDIISETAMGRKIQAQSNRDSEYVHA----IYKMSDIIQR-RQKMPWLWLDFFYAYLKDGKEH 248

  Fly   239 LSDIRVMHDFTDKVISERRETVRRAKADGTYRPLSLG-------DAEIGS---KSQMALLDILLQ 293
            ..:::::|.||||.|.||.|.:::           :|       |::..|   |.:.|.||:||.
 Frog   249 DKNLKILHAFTDKAILERAEELKK-----------MGEQKKEHCDSDPESDKPKKRSAFLDMLLM 302

  Fly   294 SSIN-NQPLSDADIREEVDTFMFEGDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLGPDASAP 357
            ::.: ...:|..|||||||||||||.|||::.::.:|:.:..|||.|:::.:||..|.| .:..|
 Frog   303 ATDDAGNKMSYMDIREEVDTFMFEGHDTTAAALNWSLFLLGSHPEAQRQVHKELDEVFG-KSDRP 366

  Fly   358 VTQAQLQDLKYLDCVIKETMRLYPPVPAIGRHAQKELEIGDKTIPANTSIYLVLYYAHRDANYFP 422
            ||...|:.|:||:.||||.:|:||.||...|...::..|....:|...::.::.|..|||..|||
 Frog   367 VTMDDLKKLRYLEAVIKEALRIYPSVPFFARTVTEDCSIRGFHVPKGVNVVIIPYALHRDPEYFP 431

  Fly   423 DPLSFRPERFLEDQEQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRFY--ELLPLGEEL 485
            :|..||||||..:...|.|.:||:|||||.:|||||:||::|.||::|.:||.|  |.....|:|
 Frog   432 EPEEFRPERFFPENASGRNPYAYIPFSAGLRNCIGQRFALMEEKVVLSSILRNYWVEASQKREDL 496

  Fly   486 KPMLNFILRSASGINVGLRPRK 507
            ..:.:.|||...|:.:.|:.|:
 Frog   497 CLLGDLILRPQDGMWIKLKNRE 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4d20NP_647723.2 p450 34..493 CDD:278495 172/483 (36%)
cyp4v2.1XP_002934446.1 p450 45..509 CDD:365848 175/488 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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