DRSC/TRiP Functional Genomics Resources

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Protein Alignment Svil and VLN5

DIOPT Version :10

Sequence 1:NP_001286919.1 Gene:Svil / 38306 FlyBaseID:FBgn0266696 Length:4526 Species:Drosophila melanogaster
Sequence 2:NP_001318818.1 Gene:VLN5 / 835837 AraportID:AT5G57320 Length:962 Species:Arabidopsis thaliana


Alignment Length:973 Identity:202/973 - (20%)
Similarity:359/973 - (36%) Gaps:325/973 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  3738 HVKGRTHVQTRL-------------VEPVHTSLNRGDCFILVAGSQLFRYVGSFANVIEISRSKK 3789
            |||...| ||||             |..|.::||..|.|||...|::|::.||.:::.|.:::.:
plant   131 HVKPEEH-QTRLYICKGKHVVRVKEVPFVRSTLNHEDVFILDTESKIFQFSGSKSSIQERAKALE 194

  Fly  3790 ICAAIVEN-KDLGCTATQEVILTDGKYLKERQWRQFWQLLG------KKEDDQSDIAECGHADED 3847
            :...|.:. .|..|..   ..:.||:.:.:.:..:||.|.|      ||.          ..::|
plant   195 VVQYIKDTYHDGKCDI---AAVEDGRMMADAEAGEFWGLFGGFAPLPKKP----------AVNDD 246

  Fly  3848 DVFESSLIETNKIYEYQDEALIPLEKFWGCIPKVDMLDTRKVLVFDFGSELYVWNGKNAPSDAKR 3912
            :...|..|:...:.:.|.:| :..|    |:.| ::|||.|..:.|.|.||:||.|::...|.::
plant   247 ETAASDGIKLFSVEKGQTDA-VEAE----CLTK-ELLDTNKCYILDCGLELFVWKGRSTSIDQRK 305

  Fly  3913 AAMRLAQEHFGAENSADYADCYLNPLNYVAIVGRRENTKYAKRCAQRPEWCVLGKITQNMETVLF 3977
            :|...|:|.|                                |.::.|: ..|..:.:..|||:|
plant   306 SATEAAEEFF--------------------------------RSSEPPK-SNLVSVMEGYETVMF 337

  Fly  3978 KEKFSDWPE-----------------IEREDLEKDYLSNGVHMVRALNGTALHKGEPYQEPNLVL 4025
            :.||..||.                 ::|:.:      |...:|:..:.::..:.:||.:     
plant   338 RSKFDSWPASSTIAEPQQGRGKVAALLQRQGV------NVQGLVKTSSSSSKDEPKPYID----- 391

  Fly  4026 EQANLGRGNFYYDTDTMRHFDVITKSTDKWQIH---EFNFDAANNRDDYGHFYSAESYIVRWIYQ 4087
                 |.||.                 ..|:|:   :...:||    :...|||.:.||:::.| 
plant   392 -----GTGNL-----------------QVWRINCEEKILLEAA----EQSKFYSGDCYILQYSY- 429

  Fly  4088 ISVTVRELSGKVSNRSTVGRDRCVYFTWQGQDSSANEKGAAALLT---VELDKEKGAQMRVSQGD 4149
                    .|:......||       ||.|:.|...::.:|..|.   ||..|...||.|:::|.
plant   430 --------PGEDREEHLVG-------TWFGKQSVEEDRASAISLANKMVESMKFVPAQARINEGK 479

  Fly  4150 ECTAFVRLFRQMWQHRGRKEQCLERH-------------SEWRLYQLQGNVSEETIIKEVVCQSS 4201
            |...|..:.:.....:|......:::             ....|:::||:..|.....::...|:
plant   480 EPIQFFVIMQSFITFKGGVSDAFKKYIAENDIPDTTYEAEGVALFRVQGSGPENMQAIQIEAASA 544

  Fly  4202 HLRSRSSMLLIHGSQGNVIVWHGSKSAPHTRNVAVGVAQDLIKTVPKDLFSAETANLTEVEEGSD 4266
            .|.| |...::|| ...|..|.|:.::...:.:...:. ||||  |.:...|:       :|||:
plant   545 GLNS-SHCYILHG-DSTVFTWCGNLTSSEDQELMERML-DLIK--PNEPTKAQ-------KEGSE 597

  Fly  4267 DDQCKKALGLKDERNEYGSLLKSTKSFDYQIRIFNFSSTQGVFKALELSDPLRCQDLHSPYPFSQ 4331
            .:|..:.||.|   :||.| .|..:..:....:|:.:.|....||.|:            :.|:|
plant   598 SEQFWELLGGK---SEYPS-QKIKRDGESDPHLFSCTYTNESLKATEI------------FNFTQ 646

  Fly  4332 SQLYNARQPTIFLLDDGDELWLWMGW---------------------WPLEDVKINT-----DER 4370
            ..|..   ..||:||...|:::|:|.                     :.||::...|     .|.
plant   647 DDLMT---EDIFILDCHTEVFVWVGQQVDPKKKPQALDIGENFLKHDFLLENLASETPIYIVTEG 708

  Fly  4371 SSPT--------NENRAGVNRWISERRAALET-----AVD--------YWRAKHGENENEP---- 4410
            :.|.        :.:::|::....:|:.|:.|     .:|        |.......::::|    
plant   709 NEPPFFTRFFTWDSSKSGMHGDSFQRKLAILTNKGKPLLDKPKRRVPAYSSRSTVPDKSQPRSRS 773

  Fly  4411 --FHGIKGQVVWAGLEPLAFKALFPDW-------------------------TERPDVREI---- 4444
              |...:.:|  .|..| ||.||..::                         :..||:.:|    
plant   774 MTFSPDRARV--RGRSP-AFNALAANFEKLNIRNQSTPPPMVSPMVRKLYPKSHAPDLSKIAPKS 835

  Fly  4445 --------------NEEDGRTDASISIATMLAQMTQT---------------------------- 4467
                          ..::..|..|.|.||..|:..::                            
plant   836 AIAARTALFEKPTPTSQEPPTSPSSSEATNQAEAPKSTSETNEEEAMSSINEDSKEEEAEEESSL 900

  Fly  4468 -EYPLEVLKA---RPLPEGVEPTRLEVYLNAEDFQAALGCSRAEFEQLPIWKQTKLKKERGLF 4526
             .:|.|.||.   .|:.: |:.||.|.||.:.:|:.....::.||.:||.|||.|||....||
plant   901 PTFPYERLKTDSEDPVSD-VDLTRREAYLTSVEFKEKFEMTKNEFYKLPKWKQNKLKMSVNLF 962

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SvilNP_001286919.1 gelsolin_S2_like 3733..3825 CDD:200445 26/100 (26%)
gelsolin_like 3859..3965 CDD:200436 23/105 (22%)
ADF_gelsolin <4069..4158 CDD:472830 24/91 (26%)
gelsolin_S5_like 4176..4279 CDD:200444 26/102 (25%)
ADF_gelsolin 4328..4435 CDD:472830 30/159 (19%)
VHP 4491..4526 CDD:460493 13/34 (38%)
VLN5NP_001318818.1 gelsolin_S1_like 12..124 CDD:200446
gelsolin_S2_like 138..232 CDD:200445 25/96 (26%)
gelsolin_S3_like 235..343 CDD:200448 35/156 (22%)
gelsolin_S4_like 388..488 CDD:200449 33/146 (23%)
gelsolin_S5_like 520..610 CDD:200444 26/104 (25%)
gelsolin_S6_like 623..722 CDD:200447 20/113 (18%)
VHP 927..962 CDD:460493 13/34 (38%)
Blue background indicates that the domain is not in the aligned region.

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