DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Svil and CAPG

DIOPT Version :9

Sequence 1:NP_001286919.1 Gene:Svil / 38306 FlyBaseID:FBgn0266696 Length:4526 Species:Drosophila melanogaster
Sequence 2:NP_001243068.1 Gene:CAPG / 822 HGNCID:1474 Length:348 Species:Homo sapiens


Alignment Length:356 Identity:79/356 - (22%)
Similarity:135/356 - (37%) Gaps:107/356 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  3638 ERLVSKRHVQGPKGRRAARNPLKSLAAREDISSEYTEMRSGIAERELRRLK-----LESYGHNAN 3697
            ||.|..|.|||.:               .|:...|..          |.||     :||..|..:
Human    90 ERPVQHREVQGNE---------------SDLFMSYFP----------RGLKYQEGGVESAFHKTS 129

  Fly  3698 LAAEAIAGLASVEDFKSVALRSSSIPLQQMWLPHKPVMLLHVKGRTHVQTRLVEPVHTSLNRGDC 3762
            ..|.|             |::.                |..|||:.:::.........|.|.|||
Human   130 TGAPA-------------AIKK----------------LYQVKGKKNIRATERALNWDSFNTGDC 165

  Fly  3763 FILVAGSQLFRYVGSFANVIEISRSKKICAAIVENKDLGCTATQEVILTDGKYLKERQWRQFWQL 3827
            |||..|..:|.:.|..:|::|.::::.:..||.:::..|  ..|..|:|||:     :..:..|:
Human   166 FILDLGQNIFAWCGGKSNILERNKARDLALAIRDSERQG--KAQVEIVTDGE-----EPAEMIQV 223

  Fly  3828 LGKKEDDQSDIAECGHADEDDVFESSLIETNKIYEYQD-EALIPLEKFWGCIP-KVDMLDTRKVL 3890
            ||.|     ...:.|:.:||...:.:..:...:|:..| ...:.|.|.....| .:::|.:....
Human   224 LGPK-----PALKEGNPEEDLTADKANAQAAALYKVSDATGQMNLTKVADSSPFALELLISDDCF 283

  Fly  3891 VFDFG--SELYVWNGKNAPSDAKRAAMRLAQEHFGAENSADYADCYLNPLNYVAIVGRRENTKYA 3953
            |.|.|  .::|:|.|:.|....::||:::|:   |..:...||     |...|.|          
Human   284 VLDNGLCGKIYIWKGRKANEKERQAALQVAE---GFISRMQYA-----PNTQVEI---------- 330

  Fly  3954 KRCAQRPEWCVLGKITQNMETVLFKEKFSDW 3984
                          :.|..|:.:||:.|.||
Human   331 --------------LPQGHESPIFKQFFKDW 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SvilNP_001286919.1 gelsolin_S2_like 3733..3825 CDD:200445 25/91 (27%)
gelsolin_like 3859..3965 CDD:200436 22/109 (20%)
ADF_gelsolin <4069..4158 CDD:301701
gelsolin_S5_like 4176..4279 CDD:200444
ADF_gelsolin 4328..4435 CDD:301701
VHP 4492..4526 CDD:280388
CAPGNP_001243068.1 gelsolin_S1_like 17..120 CDD:200446 12/54 (22%)
Gelsolin-like 1 27..75
gelsolin_S2_like 137..225 CDD:200445 26/110 (24%)
Nuclear localization signal. /evidence=ECO:0000255 137..146 4/24 (17%)
Gelsolin-like 2 148..188 13/39 (33%)
gelsolin_S3_like 251..346 CDD:200448 27/126 (21%)
Gelsolin-like 3 261..307 11/45 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1376537at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.