DRSC/TRiP Functional Genomics Resources

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Protein Alignment Svil and gsn

DIOPT Version :9

Sequence 1:NP_001286919.1 Gene:Svil / 38306 FlyBaseID:FBgn0266696 Length:4526 Species:Drosophila melanogaster
Sequence 2:XP_031746326.1 Gene:gsn / 549610 XenbaseID:XB-GENE-489535 Length:750 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SvilNP_001286919.1 gelsolin_S2_like 3733..3825 CDD:200445
gelsolin_like 3859..3965 CDD:200436
ADF_gelsolin <4069..4158 CDD:301701
gelsolin_S5_like 4176..4279 CDD:200444
ADF_gelsolin 4328..4435 CDD:301701
VHP 4492..4526 CDD:280388
gsnXP_031746326.1 gelsolin_S1_like 25..137 CDD:200446
gelsolin_S2_like 153..241 CDD:200445
gelsolin_S3_like 261..361 CDD:200448
gelsolin_S4_like 405..510 CDD:200449
gelsolin_S5_like 534..621 CDD:200444
gelsolin_S6_like 636..734 CDD:200447
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1376537at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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