DRSC/TRiP Functional Genomics Resources

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Protein Alignment Svil and Capg

DIOPT Version :9

Sequence 1:NP_001286919.1 Gene:Svil / 38306 FlyBaseID:FBgn0266696 Length:4526 Species:Drosophila melanogaster
Sequence 2:NP_001035999.1 Gene:Capg / 12332 MGIID:1098259 Length:349 Species:Mus musculus


Alignment Length:378 Identity:75/378 - (19%)
Similarity:132/378 - (34%) Gaps:150/378 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly  3638 ERLVSKRHVQG----------PKGRRAARNPLKSLAARE-DISSEYTEMRSGIAERELRRLKLES 3691
            ||.|..|.|||          |:|          |..|| .:.|.:.:..||.....:|:     
Mouse    90 ERPVQHREVQGNESDLFMSYFPRG----------LKYREGGVESAFHKTTSGATPAAIRK----- 139

  Fly  3692 YGHNANLAAEAIAGLASVEDFKSVALRSSSIPLQQMWLPHKPVMLLHVKGRTHVQTRLVEPVHTS 3756
                                                        |..|||:.:::.........|
Mouse   140 --------------------------------------------LYQVKGKKNIRATERALSWDS 160

  Fly  3757 LNRGDCFILVAGSQLFRYVGSFANVIEISRSKKICAAIVENKDLGCTATQEVILTDGKYLKERQW 3821
            .|.||||||..|..:|.:.|..:|::|.::::.:..||.:::..|  ..|..|:|||:     :.
Mouse   161 FNTGDCFILDLGQNIFAWCGGKSNILERNKARDLALAIRDSERQG--KAQVEIITDGE-----EP 218

  Fly  3822 RQFWQLLGKKEDDQSDIAECGHADEDDVFESSLIETNKIYEYQD------------------EAL 3868
            .:..|:||.|     ...:.|:.:||...:.:..:...:|:..|                  |.|
Mouse   219 AEMIQVLGPK-----PALKEGNPEEDITADQTNAQAAALYKVSDATGQMNLTKVADSSPFASELL 278

  Fly  3869 IPLEKFWGCIPKVDMLDTRKVLVFDFG--SELYVWNGKNAPSDAKRAAMRLAQEHFGAENSADYA 3931
            ||.:.|                |.|.|  .::|:|.|:.|....::||:::             |
Mouse   279 IPDDCF----------------VLDNGLCGKIYIWKGRKANEKERQAALQV-------------A 314

  Fly  3932 DCYLNPLNYVAIVGRRENTKYAKRCAQRPEWCVLGKITQNMETVLFKEKFSDW 3984
            |.:::.:.|      ..||:             :..:.|..|:.:||:.|.:|
Mouse   315 DGFISRMRY------SPNTQ-------------VEILPQGRESPIFKQFFKNW 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SvilNP_001286919.1 gelsolin_S2_like 3733..3825 CDD:200445 25/91 (27%)
gelsolin_like 3859..3965 CDD:200436 21/125 (17%)
ADF_gelsolin <4069..4158 CDD:301701
gelsolin_S5_like 4176..4279 CDD:200444
ADF_gelsolin 4328..4435 CDD:301701
VHP 4492..4526 CDD:280388
CapgNP_001035999.1 gelsolin_S1_like 17..120 CDD:200446 12/39 (31%)
gelsolin_S2_like 139..226 CDD:200445 26/142 (18%)
gelsolin_S3_like 247..347 CDD:200448 26/147 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1376537at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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