DRSC/TRiP Functional Genomics Resources

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Protein Alignment Svil and Avil

DIOPT Version :9

Sequence 1:NP_001286919.1 Gene:Svil / 38306 FlyBaseID:FBgn0266696 Length:4526 Species:Drosophila melanogaster
Sequence 2:XP_006513161.1 Gene:Avil / 11567 MGIID:1333798 Length:878 Species:Mus musculus


Alignment Length:878 Identity:210/878 - (23%)
Similarity:344/878 - (39%) Gaps:251/878 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  3736 LLHVKGRTHVQTRLVE--------PV---------------HT-------SLNRGDCFILVAGSQ 3770
            ||||||:.::|...|.        ||               ||       |.||||.|:|..|..
Mouse   165 LLHVKGKRNIQATEVSLTRECPGCPVLPPWHLRLPRTALTAHTQVEMSWDSFNRGDVFLLDLGMV 229

  Fly  3771 LFRYVGSFANVIEISRSKKICAAIVENKDLGCTATQEVILTDGKYLKERQWRQFWQLLGKKEDDQ 3835
            :.::.|..:|..|..:: .:.|..:.:::.|..|...||..|.:.............||::...:
Mouse   230 IIQWNGPESNSGERLKA-MLLAKDIRDRERGGRAEIGVIEGDKEAASPGLMTVLQDTLGRRSMIK 293

  Fly  3836 SDIAECGHADEDDVFESSLIETNKIYEYQDE---------ALIPLEKFWGCIPKVDMLDTRKVLV 3891
            ..::       |::.:.....:..:|...|.         |..||.:        |:|:.....:
Mouse   294 PAVS-------DEIMDQQQKSSIMLYHVSDTAGQLSVTEVATRPLVQ--------DLLNHDDCYI 343

  Fly  3892 FD-FGSELYVWNGKNAPSDAKRAAMRLAQEHFGAENSADYADCYLNPLNYVAIVGRRENTKYAKR 3955
            .| .|:::|||.||.|....|:|||..|                   |:::.:.|...:|.    
Mouse   344 LDQSGTKIYVWKGKGATKVEKQAAMSKA-------------------LDFIKMKGYPSSTN---- 385

  Fly  3956 CAQRPEWCVLGKITQNMETVLFKEKFSDWP-EIEREDLEKDYLSNGVHMV--RALNGTALHKGEP 4017
                     :..:....|:.:||:.|..|. :.:...|.|.:.:..:..:  ...:.:.||    
Mouse   386 ---------VETVNDGAESAMFKQLFQKWSVKDQTTGLGKIFSTGKIAKIFQDKFDVSLLH---- 437

  Fly  4018 YQEPNLVLEQANL--GRGNFYYDTDTMRHFDVITKSTDKWQIH-------EFNFDAANNRDDYGH 4073
             .:|.:..::..:  |:|                 ..:.|:|.       |:.:        :|.
Mouse   438 -TKPEVAAQERMVDDGKG-----------------QVEVWRIENLELVPVEYQW--------HGF 476

  Fly  4074 FYSAESYIVRWIYQISVTVRELSGKVSNRSTVGRDRCVYFTWQGQDSSANEKGAAALLTVELDKE 4138
            ||..:.|:|.:.|.::                |:...:.:.|||:.:|.:|..|:|...||:|::
Mouse   477 FYGGDCYLVLYTYDVN----------------GKPHYILYIWQGRHASRDELAASAYRAVEVDQQ 525

  Fly  4139 -KGA--QMRVSQGDECTAFVRLFRQM-------WQHRGRKEQCLERHSEWRLYQLQGNVSEETII 4193
             .||  |:|||.|.|...|:.:|:..       ...:|.:|.    ....||:|:.||....|..
Mouse   526 FDGAPVQVRVSMGKEPRHFMAIFKGKLVIYEGGTSRKGNEEP----DPPVRLFQIHGNDKSNTKA 586

  Fly  4194 KEVVCQSSHLRSRSSMLLIHGSQGNVIVWHGSKSAPHTRNVAVGVAQDLIKTVPKDLFSAETANL 4258
            .||...:|.|.|....||  .:|....:|:|..|:...|    .:|::|:     ||..  ..|.
Mouse   587 VEVSASASSLNSNDVFLL--RTQAEHYLWYGKGSSGDER----AMAKELV-----DLLC--DGNA 638

  Fly  4259 TEVEEGSDDDQCKKALGLK-----DERNEYGSLLKSTKSFDYQIRIFNFSSTQGVFKALELSDPL 4318
            ..|.||.:..:....||.|     |:|.:..:|       |.|:|:|..|:..|.|...|::|  
Mouse   639 DTVAEGQEPPEFWDLLGGKTAYANDKRLQQETL-------DVQVRLFECSNKTGRFLVTEVTD-- 694

  Fly  4319 RCQDLHSPYPFSQSQLYNARQP-TIFLLDDGDELWLWMGWWPLEDVKINTDERSSPTNENRAGVN 4382
                      |:|..|    .| .:.|||..|:::||:|                      |..|
Mouse   695 ----------FTQEDL----SPGDVMLLDTWDQVFLWIG----------------------AEAN 723

  Fly  4383 RWISERRAALETAVDYWRAKH--GENENEPFHGIKGQVVWAGLEPLAFKALF----PD-WTERPD 4440
              .:|::.||.||.:| ...|  |.:.:.|...||     .|.||..|...|    |. |:|...
Mouse   724 --ATEKKGALSTAQEY-LVTHPSGRDPDTPILIIK-----QGFEPPTFTGWFLAWDPHIWSEGKS 780

  Fly  4441 VREINEEDG------RTDASISIATMLAQMTQTE---YPLEVL---KARPLPEGVEPTRLEVYLN 4493
            ..::..|.|      |..|.:..||:....:..|   ||:|||   :.:.|||.|:|.:.|.||:
Mouse   781 YEQLKNELGDATAIVRITADMKNATLYLNPSDGEPKYYPVEVLLKGQNQELPEDVDPAKKENYLS 845

  Fly  4494 AEDFQAALGCSRAEFEQLPIWKQTKLKKERGLF 4526
            .:||.:..|.:|.:|..||.|||.:||||||||
Mouse   846 EQDFVSVFGITRGQFTALPGWKQLQLKKERGLF 878

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SvilNP_001286919.1 gelsolin_S2_like 3733..3825 CDD:200445 29/118 (25%)
gelsolin_like 3859..3965 CDD:200436 23/115 (20%)
ADF_gelsolin <4069..4158 CDD:301701 26/91 (29%)
gelsolin_S5_like 4176..4279 CDD:200444 29/107 (27%)
ADF_gelsolin 4328..4435 CDD:301701 30/114 (26%)
VHP 4492..4526 CDD:280388 17/33 (52%)
AvilXP_006513161.1 gelsolin_S1_like 36..147 CDD:200446
gelsolin_S2_like 162..282 CDD:200445 29/117 (25%)
gelsolin_S3_like 306..404 CDD:200448 27/137 (20%)
gelsolin_S4_like 448..548 CDD:200449 31/140 (22%)
gelsolin_S5_like 569..658 CDD:200444 28/101 (28%)
gelsolin_S6_like 676..771 CDD:200447 36/140 (26%)
VHP 843..878 CDD:128458 18/34 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1376537at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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