DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL23 and mrpl23

DIOPT Version :10

Sequence 1:NP_523889.1 Gene:mRpL23 / 38302 FlyBaseID:FBgn0035335 Length:150 Species:Drosophila melanogaster
Sequence 2:NP_001002052.1 Gene:mrpl23 / 415142 ZFINID:ZDB-GENE-040625-12 Length:153 Species:Danio rerio


Alignment Length:150 Identity:71/150 - (47%)
Similarity:93/150 - (62%) Gaps:8/150 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YPIYQRGNPQLRVFLPNFWMKLIRPTEEQPPNVVTFSVSMEMTKYDVRNYLEKIYKLPVVDVRTR 70
            ||:||.||||||:|.|.|.|.|:||.:||||:.|.|.:||.|||.||||||||||.:||..||||
Zfish     7 YPLYQLGNPQLRIFRPTFNMTLVRPGKEQPPDTVQFRISMAMTKCDVRNYLEKIYSVPVSAVRTR 71

  Fly    71 IAMGETKKDQTYGYITKKDDVKLAYVTLPREESFVFPDFFSEKAEKQAKEEKSLDESKAGFRRFL 135
            |.....||........|:.|.|:|||.|.::::|.|||.|.||.:|  .:|.|::|....|... 
Zfish    72 IQYCSNKKRNHLNQRVKRPDYKVAYVQLAQQQTFQFPDIFPEKDKK--SKEGSVEEMHEKFMED- 133

  Fly   136 DRNKKRP-----GTPGWFSI 150
            :|.:::|     |...||.:
Zfish   134 ERQRQKPDPRRGGVTEWFGL 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL23NP_523889.1 Ribosomal_L23 <37..105 CDD:459743 33/67 (49%)
mrpl23NP_001002052.1 Ribosomal_L23 <42..105 CDD:459743 32/62 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 110..153 13/45 (29%)

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