DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8993 and ATHM2

DIOPT Version :10

Sequence 1:NP_647716.1 Gene:CG8993 / 38301 FlyBaseID:FBgn0035334 Length:142 Species:Drosophila melanogaster
Sequence 2:NP_192261.1 Gene:ATHM2 / 825653 AraportID:AT4G03520 Length:186 Species:Arabidopsis thaliana


Alignment Length:140 Identity:37/140 - (26%)
Similarity:65/140 - (46%) Gaps:28/140 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 TTRRL------ASGQQIR-------MLSVSAPR------------QEI---FKVQSAEDFDKKVK 48
            ::||:      :||.:||       :.|:..||            ||.   .:|.:...:|..|.
plant    31 SSRRMFAVLPESSGLRIRLSLSPASLTSIHQPRVSRLRRAVVCEAQETTTDIQVVNDSTWDSLVL 95

  Fly    49 NSQQPVIVDFFATWCNPCKLLTPRIESIVGEQAGSIKLAKVDIDEHSELALDYDVAAVPVLVVLQ 113
            .:..||:|||:|.||.|||::.|.:..:.....|.||..|::.||.......|.|.::|.:::..
plant    96 KATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVRSIPTIMIFV 160

  Fly   114 NGKEVQRMVG 123
            .|::...::|
plant   161 GGEKKDTIIG 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8993NP_647716.1 CnoX 39..138 CDD:442352 25/85 (29%)
ATHM2NP_192261.1 CnoX 82..185 CDD:442352 26/89 (29%)

Return to query results.
Submit another query.