DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8993 and txnl1

DIOPT Version :9

Sequence 1:NP_647716.1 Gene:CG8993 / 38301 FlyBaseID:FBgn0035334 Length:142 Species:Drosophila melanogaster
Sequence 2:NP_001006844.1 Gene:txnl1 / 448593 XenbaseID:XB-GENE-965625 Length:289 Species:Xenopus tropicalis


Alignment Length:80 Identity:20/80 - (25%)
Similarity:37/80 - (46%) Gaps:4/80 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 IVDFFATWCNPCKLLTPRIESIVGEQAGSIKLAKVDIDEHSELALDYDVAAVPVLVVLQNGKEVQ 119
            :|.|....|.||..:.|...|:..:...:|.| :||:.:....|...:::|.|..:..:|..::.
 Frog    26 VVKFTMKGCAPCVRIAPAFTSLSNKYPQAIFL-EVDVHQCQATATANNISATPTFLFFRNKVKID 89

  Fly   120 RMVGLQD---EDKIR 131
            :..|...   ||||:
 Frog    90 QYQGADAAGLEDKIK 104

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8993NP_647716.1 Thioredoxin_like 39..138 CDD:294274 20/80 (25%)
txnl1NP_001006844.1 TRX_family 12..104 CDD:239245 19/78 (24%)
PITH 126..268 CDD:368787
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1482186at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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