DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG8993 and pdia8

DIOPT Version :9

Sequence 1:	NP_647716.1	Gene:	CG8993 / 38301	FlyBaseID:	FBgn0035334	Length:	142	Species:	Drosophila melanogaster
Sequence 2:	NP_001003517.1	Gene:	pdia8 / 445123	ZFINID:	ZDB-GENE-040801-20	Length:	493	Species:	Danio rerio

Alignment Length:	107	Identity:	37/107 - (34%)
Similarity:	54/107 - (50%)	Gaps:	3/107 - (2%)

- Green bases have known domain annotations that are detailed below.

  Fly    25 LSVSA-PRQEIFKVQSAEDFDKKVKNSQQPVIVDFFATWCNPCKLLTPRIESIVGEQAGSIKLAK 88
            ||.|| ...::.|:..| ||| .:....:.::|.|:|.||..||.|.|..||......|::.|||
Zfish    17 LSSSAREHSDVLKLTDA-DFD-YLAPEHETLLVKFYAPWCGHCKKLAPEFESAASRLKGTVTLAK 79

  Fly    89 VDIDEHSELALDYDVAAVPVLVVLQNGKEVQRMVGLQDEDKI 130
            ||...::|:...|.|...|.|.:.:||:|.....|.:..|.|
Zfish    80 VDCTANTEICKHYGVNGYPTLKIFRNGQESSSYDGPRSADGI 121

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG8993	NP_647716.1	Thioredoxin_like	39..138	CDD:294274	32/92 (35%)
pdia8	NP_001003517.1	ER_PDI_fam	25..484	CDD:273457	33/99 (33%)
		pdi_dom	30..129	CDD:273454	32/94 (34%)
		PDI_b_ERp57	132..236	CDD:239367
		PDI_b'_ERp72_ERp57	240..353	CDD:239371
		PDI_a_PDI_a'_C	373..476	CDD:239293
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910